Parental gene:

BNIP3L, ENSSSCG00000009658

Aliases:None
Description:BCL2/adenovirus E1B 19kDa interacting protein 3-like [Source:HGNC Symbol;Acc:1085]
Organism:Pig (Sus scrofa)
Coordinates:14:11483859..11510801(+)


>ENSSSCG00000009658
ACAATGTCTCACTTAGTAGAGCAGCCGCCTCCTCTGCACAACAACAACAACAACTGTGAGGAAGGTGAACAGTCTCTGCC
CCCGCCAGCCGGCCTCAACAGTTCCTGGGTGGAGCTACCCATGAATAGCAGCAATGGCAATGATAATGGCAATGGGAAAA
ATGGGGGGCTAGAACATGTACCTTCCTCATCCTCTATCCACAATGGAGACATGGAGAAGATTCTTTTGGATGCACAACAC
GAATCTGGACAGAGTAGTTCCAGAGGCAGTTCCCACTGTGACAGCCCTTCCCCACAAGAAGACGGGCAGATCATGTTTGA
TGTGGAAATGCACACCAGCAGGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGTAGAAGGAGAGAAAGAAGTGGATGCTT
TGAAGAAAAGCGTAGACTGGGTGTCTGATTGGTCCAGTAGACCTGAAAACATTCCACCTAAGGAGTTCCACTTCAGGCAC
CCTAAACGTTCCGTTTCTCTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGGATTTTCTCCGCAGAATTTCTTAA
GGTGTTCATTCCATCTCTCTTCCTCTCTCATGTTTTGGCTTTGGGGCTAGGCATCTACATTGGAAAACGACTGAGTACAC
CTTCTGCCAGCACCTACTGA

Library Parental gene expression (RPM)
SRP014902_placenta 54 .02 RPM
SRP014902_testis 64 .22 RPM
SRP018856_adipose 125 .84 RPM
SRP018288_kidney 58 .32 RPM
SRP018288_lung 118 .32 RPM
SRP018288_liver 42 .86 RPM
SRP018288_heart 40 .10 RPM
SRP035408_liver 28 .39 RPM
SRP035408_brain 97 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021307 ortholog_one2one 4 retrogenes
retro_btau_1148, retro_btau_1170, retro_btau_1790, retro_btau_449,
Choloepus hoffmanni ENSCHOG00000007732 ortholog_one2one 3 retrogenes
retro_chof_2356, retro_chof_2475, retro_chof_980,
Dasypus novemcinctus ENSDNOG00000016179 ortholog_one2one 1 retrogene
retro_dnov_2101,
Dipodomys ordii ENSDORG00000009336 ortholog_one2one 1 retrogene
retro_dord_169,
Erinaceus europaeus ENSEEUG00000006302 ortholog_one2one 1 retrogene
retro_eeur_269,
Echinops telfairi ENSETEG00000012037 ortholog_one2one 3 retrogenes
retro_etel_1178, retro_etel_1428, retro_etel_603,
Felis catus ENSFCAG00000030159 ortholog_one2one 2 retrogenes
retro_fcat_616, retro_fcat_944,
Macropus eugenii ENSMEUG00000011173 ortholog_one2one 1 retrogene
retro_meug_962,
Myotis lucifugus ENSMLUG00000014949 ortholog_one2one 1 retrogene
retro_mluc_2192,
Mustela putorius furo ENSMPUG00000000829 ortholog_one2many 1 retrogene
retro_mputfur_297,
Mus musculus ENSMUSG00000022051 ortholog_one2one 2 retrogenes
retro_mmus_482, retro_mmus_849,
Oryctolagus cuniculus ENSOCUG00000010542 ortholog_one2one 1 retrogene
retro_ocun_1460,
Otolemur garnettii ENSOGAG00000003163 ortholog_one2one 2 retrogenes
retro_ogar_1039, retro_ogar_2651,
Ochotona princeps ENSOPRG00000016284 ortholog_one2one 1 retrogene
retro_opri_1105,
Rattus norvegicus ENSRNOG00000009820 ortholog_one2many 1 retrogene
retro_rnor_1183,
Sus scrofa ENSSSCG00000024388 within_species_paralog 1 retrogene
retro_sscr_827,
Ictidomys tridecemlineatus ENSSTOG00000004029 ortholog_one2one 1 retrogene
retro_itri_1525,
Tupaia belangeri ENSTBEG00000006361 ortholog_one2one 2 retrogenes
retro_tbel_3371, retro_tbel_4006,
Tarsius syrichta ENSTSYG00000011036 ortholog_one2one 4 retrogenes
retro_tsyr_1182, retro_tsyr_1602, retro_tsyr_162, retro_tsyr_1997,
Tursiops truncatus ENSTTRG00000004862 ortholog_one2one 1 retrogene
retro_ttru_725,
Vicugna pacos ENSVPAG00000000509 ortholog_one2one 2 retrogenes
retro_vpac_349, retro_vpac_534,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_511 61.58 83.56
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Download FASTA sequences of all ENSSSCG00000009658 retrocopies