Parental gene:

BNIP3L, ENSBTAG00000021307

Aliases:None
Description:BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like [Source:UniProtKB/Swiss-Prot;Acc:Q3T013]
Organism:Cow (Bos taurus)
Coordinates:8:74924183..74947549(+)


>ENSBTAG00000021307
ATGTCGTCTCACTTAGTAGAACAGCCGCCGCCCCCGCACAACAACAACAATAACTGTGAGGAAGGCGAACAGTCTCTGCC
ACCGCCTGCCGGCCTCAACAGTTCCTGGGTGGAGCTCCCCATGAACAGCAGCAATGGCAATGATAATGGCAATGGGAAGA
ATGGGGGGCTAGAGCACGTACCCTCCTCATCCTCCATCCACAATGGAGACATGGAGAAGATTCTTTTGGACGCACAGCAT
GAATCCGGACAGAGCAGTTCAAGAGGCAGTTCTCATTGCGACAGCCCTTCCCCACAAGAAGATGGGCAGATCATGTTTGA
TGTGGAAATGCACACCAGCAAGGACCATAGCTCTCAGTCAGAAGAAGAAGTTGCAGAAGGAGAGAAAGAAGTGGATGCTC
TGAAGAAAAGCGTAGACTGGGTGTCCGACTGGTCCAGTAGACCTGAAAACATTCCACCCAAGGAGTTCCACTTCAGGCAC
CCTAAGCGTTCCGTTTCCTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGGGGGATCTTCTCCGCAGAGTTTCTCAA
GGTGTTCATTCCATCTCTCTTCCTCTCCCATGTTTTGGCTTTGGGGCTAGGCATCTACATTGGAAAACGACTGAGCACGC
CTTCTGCCAGCACCTACTAA

Library Parental gene expression (RPM)
SRP017611_brain 51 .02 RPM
SRP017611_kidney 58 .09 RPM
SRP017611_liver 39 .42 RPM
ERP005899_muscle 53 .95 RPM
ERP005899_liver 47 .29 RPM
SRP030211_testis 44 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007732 ortholog_one2one 3 retrogenes
retro_chof_2356, retro_chof_2475, retro_chof_980,
Dasypus novemcinctus ENSDNOG00000016179 ortholog_one2one 1 retrogene
retro_dnov_2101,
Dipodomys ordii ENSDORG00000009336 ortholog_one2one 1 retrogene
retro_dord_169,
Erinaceus europaeus ENSEEUG00000006302 ortholog_one2one 1 retrogene
retro_eeur_269,
Echinops telfairi ENSETEG00000012037 ortholog_one2one 3 retrogenes
retro_etel_1178, retro_etel_1428, retro_etel_603,
Felis catus ENSFCAG00000030159 ortholog_one2one 2 retrogenes
retro_fcat_616, retro_fcat_944,
Macropus eugenii ENSMEUG00000011173 ortholog_one2one 1 retrogene
retro_meug_962,
Myotis lucifugus ENSMLUG00000014949 ortholog_one2one 1 retrogene
retro_mluc_2192,
Mustela putorius furo ENSMPUG00000000829 ortholog_one2many 1 retrogene
retro_mputfur_297,
Mus musculus ENSMUSG00000022051 ortholog_one2one 2 retrogenes
retro_mmus_482, retro_mmus_849,
Oryctolagus cuniculus ENSOCUG00000010542 ortholog_one2one 1 retrogene
retro_ocun_1460,
Otolemur garnettii ENSOGAG00000003163 ortholog_one2one 2 retrogenes
retro_ogar_1039, retro_ogar_2651,
Ochotona princeps ENSOPRG00000016284 ortholog_one2one 1 retrogene
retro_opri_1105,
Rattus norvegicus ENSRNOG00000009820 ortholog_one2many 1 retrogene
retro_rnor_1183,
Sus scrofa ENSSSCG00000009658 ortholog_one2one 1 retrogene
retro_sscr_511,
Ictidomys tridecemlineatus ENSSTOG00000004029 ortholog_one2one 1 retrogene
retro_itri_1525,
Tupaia belangeri ENSTBEG00000006361 ortholog_one2one 2 retrogenes
retro_tbel_3371, retro_tbel_4006,
Tarsius syrichta ENSTSYG00000011036 ortholog_one2one 4 retrogenes
retro_tsyr_1182, retro_tsyr_1602, retro_tsyr_162, retro_tsyr_1997,
Tursiops truncatus ENSTTRG00000004862 ortholog_one2one 1 retrogene
retro_ttru_725,
Vicugna pacos ENSVPAG00000000509 ortholog_one2one 2 retrogenes
retro_vpac_349, retro_vpac_534,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_449 84.62 100.00
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2. retro_btau_1148 99.54 100.00
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3. retro_btau_1170 79.82 100.00
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4. retro_btau_1790 89.09 100.00
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Download FASTA sequences of all ENSBTAG00000021307 retrocopies