Parental gene:

DCTPP1, ENSSSCG00000007796

Aliases:None
Description:dCTP pyrophosphatase 1 [Source:HGNC Symbol;Acc:28777]
Organism:Pig (Sus scrofa)
Coordinates:3:18312090..18315959(-)


>ENSSSCG00000007796
ATGTCCGAAAGTGGGGAGACGCATGAGGACTCTGGGGGAGAGGGCTTTGCCGCCGCCGGCTCCTTCAGCTTCAGCTCGGA
ACCCACGCTCGAGGACATCCGCCGCCTCCATGCCGAGTTTGCTGCTGAACGAGACTGGGACCAGTTCCATCAGCCTCGGA
ACCTCCTCCTGGCCTTGGTGGGAGAAGTGGGAGAACTGGCAGAGCTCTTTCAGTGGAAGCCCGATGAGGAGCCGGGGCCC
CAAGCCTGGTCCCCCAGGGAACGAGCAGCGCTTCAAGAGGAGCTGAGCGATGTCCTCATCTACCTGGTAGCATTAGCAGC
CCGCTGCCGGGTGGATCTGCCCCAAGCTGTGCTTTCGAAGATGGACACTAACCGGCGACGCTACCCAGCACATCTGTCGC
GCGGCTCGGCCCGAAAGTATACAGACCTGCCCCGTGGGGCCACCTCAGACCAGGCTGTGACGCCTGCAGACCTCGCCTGT
GAGTCCACAGGTCAGGCCTCAATC

Library Parental gene expression (RPM)
SRP014902_placenta 1 .19 RPM
SRP014902_testis 16 .12 RPM
SRP018856_adipose 1 .03 RPM
SRP018288_kidney 1 .48 RPM
SRP018288_lung 0 .71 RPM
SRP018288_liver 1 .60 RPM
SRP018288_heart 0 .86 RPM
SRP035408_liver 0 .91 RPM
SRP035408_brain 1 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000016594 ortholog_one2many 1 retrogene
retro_cfam_887,
Callithrix jacchus ENSCJAG00000002621 ortholog_one2many 2 retrogenes
retro_cjac_43, retro_cjac_676,
Myotis lucifugus ENSMLUG00000013774 ortholog_one2one 1 retrogene
retro_mluc_1052,
Otolemur garnettii ENSOGAG00000011361 ortholog_one2one 1 retrogene
retro_ogar_874,
Rattus norvegicus ENSRNOG00000017850 ortholog_one2one 2 retrogenes
retro_rnor_1173, retro_rnor_2626,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_676 61.88 92.86
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Download FASTA sequences of all ENSSSCG00000007796 retrocopies