Parental gene:

ENSCAFG00000016594

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:6:17679756..17683450(+)


>ENSCAFG00000016594
ATGTCTCGGGCGAATGGGGACGCGCGTGGGGACACGGTGGGAAACGGCACTGCTGCTGCCAGCCCCTTCAGCTTCAGCCC
GGAGCCCACACTCGAGGACATCCGCCGCCTGCATGCTGAGTTTGCTGCTGAACGAGACTGGGGCCAATTCCACCAGCCTC
GGAACCTCCTGCTGGCCTTGGTGGGGGAAGTGGGGGAGCTAGCAGAGCTCTTTCAGTGGAAGCCTGATGAGGAGCCTGGC
CCCCAAGCCTGGTCCCCCAGGGAACGGGCAGCCCTTCAAGAGGAACTTAGTGATGTCCTCATCTACCTGGTAGCACTAGC
AGCCCGCTGCCATGTGGACCTGCCCCAAGCAGTGCTCTCCAAGATGGACCTCAACCGCCGGCGCTACCCAGCACATCTGT
CCCGTGGCTCTGCCCTCAAGTATACAGACTTGCCCCATGGGGCCACCTGTGAAGACCAAGCTGTGGGGCCTGCAAACCTT
GACCGTGAGTCCACAGGCGAGGCCTCAACCTAG

Library Parental gene expression (RPM)
SRP017611_brain 3 .81 RPM
SRP017611_kidney 2 .97 RPM
SRP017611_liver 1 .74 RPM
SRP012049_cerebellum 9 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002621 ortholog_many2many 2 retrogenes
retro_cjac_43, retro_cjac_676,
Myotis lucifugus ENSMLUG00000013774 ortholog_one2many 1 retrogene
retro_mluc_1052,
Otolemur garnettii ENSOGAG00000011361 ortholog_one2many 1 retrogene
retro_ogar_874,
Rattus norvegicus ENSRNOG00000017850 ortholog_one2many 2 retrogenes
retro_rnor_1173, retro_rnor_2626,
Sus scrofa ENSSSCG00000007796 ortholog_one2many 1 retrogene
retro_sscr_676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_887 60.23 50.59
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000016594 retrocopies