Parental gene:

MRPL13, ENSSSCG00000005996

Aliases:None
Description:mitochondrial ribosomal protein L13 [Source:HGNC Symbol;Acc:14278]
Organism:Pig (Sus scrofa)
Coordinates:4:19634624..19696795(+)


>ENSSSCG00000005996
ATGTCGAGTTTCTCCAAGGCGCCCCAGCAATGGGCCACGTTTGCTCGAGTTTGGTATCTCCTAGATGGGAAAATGCAGCC
CCCTGGCAAACTTGCTGCCATGGCCTCAGTTAAACTTCAAGGATTGCATAAACCTGTGTATCATCAACTGAGTGACTGTG
GAGATCATGTTGTCATAATGAACACAAGGCACATTGCATTTTCTGGAAACAAATGGGAACAAAAAGTATACTCCTCACAT
ACTGGCTACCCAGGTGGATTCAGACAAGTAACAGCTGCTCAGCTTCACCAGAAGGATCCAGTGGCGATTGTAAAACTAGC
TATTTATGGCATGTTGCCAAAAAACCTTCACAGAAGAACTATGATGCAGAGGTTGCATCTTTTCCCAGATGAAGATATAC
CAGAAGATATCCTTAAGAATTTAGTTGAAGAGCTTCCTCAACCACGAAAAGTGCCCCGACGTCTGGATGAGTACACACAA
GAAGAAATAGAAGCTTTCCCAAGAGTTTGGTCTCCGCCTGAAGATTATCGGCTGTAG

Library Parental gene expression (RPM)
SRP014902_placenta 5 .57 RPM
SRP014902_testis 13 .15 RPM
SRP018856_adipose 11 .02 RPM
SRP018288_kidney 20 .59 RPM
SRP018288_lung 10 .59 RPM
SRP018288_liver 12 .47 RPM
SRP018288_heart 17 .71 RPM
SRP035408_liver 31 .97 RPM
SRP035408_brain 43 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006926 ortholog_one2one 1 retrogene
retro_chof_648,
Callithrix jacchus ENSCJAG00000005359 ortholog_one2many 1 retrogene
retro_cjac_162,
Dipodomys ordii ENSDORG00000016654 ortholog_one2one 1 retrogene
retro_dord_480,
Equus caballus ENSECAG00000021161 ortholog_one2one 1 retrogene
retro_ecab_952,
Mustela putorius furo ENSMPUG00000001080 ortholog_one2one 2 retrogenes
retro_mputfur_1585, retro_mputfur_623,
Oryctolagus cuniculus ENSOCUG00000016189 ortholog_one2one 1 retrogene
retro_ocun_675,
Ochotona princeps ENSOPRG00000015721 ortholog_one2one 2 retrogenes
retro_opri_274, retro_opri_454,
Pteropus vampyrus ENSPVAG00000003719 ortholog_one2one 1 retrogene
retro_pvam_627,
Rattus norvegicus ENSRNOG00000004401 ortholog_one2one 1 retrogene
retro_rnor_2720,
Tupaia belangeri ENSTBEG00000004571 ortholog_one2one 5 retrogenes
retro_tbel_1026, retro_tbel_1596, retro_tbel_2517, retro_tbel_3095, retro_tbel_456,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1183 82.98 61.04
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Download FASTA sequences of all ENSSSCG00000005996 retrocopies