Parental gene:

MRPL13, ENSECAG00000021161

Aliases:None
Description:mitochondrial ribosomal protein L13 [Source:HGNC Symbol;Acc:14278]
Organism:Horse (Equus caballus)
Coordinates:9:63296652..63326936(-)


>ENSECAG00000021161
ATGTCGAGTTTCTCCAGGGCGCCCCAGCAATGGGCTACTTTTGCTCGAGTTTGGTATCTCTTAGATGGGAAAATGCAGCC
TCCTGGGAAACTTGCTGCTATGGCATCAATTAAACTTCAAGGATTGCATAAACCTGTGTACCATCAACTGAGTGACTGTG
GGGATCATGTTGTCATAATGAACACAAGGCACATTGCATTTTCTGGAAACAAATGGGAACAAAAAGTGTACTCCTCACAT
ACTGGCTACCCAGGTGGATTTAAACAGGTAACAGCTGCTCAGCTTCACCAGAAGGATCCAGTGGCAATTGTAAAACTGGC
TATTTATGGCATGCTGCCAAAAAACCTTCACAGAAGAACTATGATGCAGAGGTTGCATCTTTTCCCAGATGAGGACATAC
CAGAAGATATTCTTAAGAATTTAGTGGAAGAGCTTCCTCAACCTCGGAAAGTACCCAGACGTCTCGATGAGTACACACAA
GAAGAAATAGAGGCTTTCCCAAGAGTGTGGTCTCCGTAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 4 .17 RPM
SRP021940_embryo 6 .11 RPM
SRP021940_cerebellum 4 .67 RPM
SRP021940_testis 5 .31 RPM
SRP021940_placental_villous 4 .52 RPM
SRP021940_articular_cartilage 3 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006926 ortholog_one2one 1 retrogene
retro_chof_648,
Callithrix jacchus ENSCJAG00000005359 ortholog_one2many 1 retrogene
retro_cjac_162,
Dipodomys ordii ENSDORG00000016654 ortholog_one2one 1 retrogene
retro_dord_480,
Mustela putorius furo ENSMPUG00000001080 ortholog_one2one 2 retrogenes
retro_mputfur_1585, retro_mputfur_623,
Oryctolagus cuniculus ENSOCUG00000016189 ortholog_one2one 1 retrogene
retro_ocun_675,
Ochotona princeps ENSOPRG00000015721 ortholog_one2one 2 retrogenes
retro_opri_274, retro_opri_454,
Pteropus vampyrus ENSPVAG00000003719 ortholog_one2one 1 retrogene
retro_pvam_627,
Rattus norvegicus ENSRNOG00000004401 ortholog_one2one 1 retrogene
retro_rnor_2720,
Sus scrofa ENSSSCG00000005996 ortholog_one2one 1 retrogene
retro_sscr_1183,
Tupaia belangeri ENSTBEG00000004571 ortholog_one2one 5 retrogenes
retro_tbel_1026, retro_tbel_1596, retro_tbel_2517, retro_tbel_3095, retro_tbel_456,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_952 96.61 68.60
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Download FASTA sequences of all ENSECAG00000021161 retrocopies