Parental gene:

DPPA5, ENSSSCG00000004283

Aliases:None
Description:developmental pluripotency associated 5 [Source:HGNC Symbol;Acc:19201]
Organism:Pig (Sus scrofa)
Coordinates:1:59322089..59323218(-)


>ENSSSCG00000004283
ATGGGGAAGCTGCCACCGAAGCCGAATGACATCCTGTCTTGGGTAGGAGCTCCCGAAGACTTCACAGAGCCGGAGGTGTT
CCAGGTCCAGACGCGGCTGCTGGAAGCCTTATTTGGCCCCGAGGGATCTCGAATCCCGTATGTCGAGAAGGTGAGCAAAG
TTATGCTCGAGATGAAGGCTCTGGAATCTTCGGACCTCACCGAAGTCATGGTTTACGGTCCTTACTTGTACAAGTTCCGG
ACCAAGTGGATGCTCCAGTCTATGGCAGAGTGGCACTGCCAGCGTCAGGAACGAGGGATGCGCAGACTTGAGGAAGCCAT
GAATTCACTTGAGCTATGTCCTCCGATGAAGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 0 .13 RPM
SRP014902_testis 0 .14 RPM
SRP018856_adipose 0 .00 RPM
SRP018288_kidney 0 .00 RPM
SRP018288_lung 0 .10 RPM
SRP018288_liver 0 .00 RPM
SRP018288_heart 0 .00 RPM
SRP035408_liver 0 .12 RPM
SRP035408_brain 0 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002647 ortholog_one2one 2 retrogenes
retro_cfam_1216, retro_cfam_524,
Choloepus hoffmanni ENSCHOG00000012338 ortholog_one2one 1 retrogene
retro_chof_2495,
Callithrix jacchus ENSCJAG00000009945 ortholog_one2many 3 retrogenes
retro_cjac_1978, retro_cjac_62, retro_cjac_85,
Dasypus novemcinctus ENSDNOG00000011544 ortholog_one2many 4 retrogenes
retro_dnov_115, retro_dnov_15, retro_dnov_2318, retro_dnov_53,
Dipodomys ordii ENSDORG00000000378 ortholog_one2one 2 retrogenes
retro_dord_324, retro_dord_690,
Homo sapiens ENSG00000203909 ortholog_one2one 1 retrogene
retro_hsap_2067,
Gorilla gorilla ENSGGOG00000012001 ortholog_one2one 1 retrogene
retro_ggor_1489,
Myotis lucifugus ENSMLUG00000004463 ortholog_one2one 1 retrogene
retro_mluc_1051,
Macaca mulatta ENSMMUG00000000417 ortholog_one2one 1 retrogene
retro_mmul_1409,
Mus musculus ENSMUSG00000060461 ortholog_one2many 7 retrogenes
retro_mmus_127, retro_mmus_1280, retro_mmus_1537, retro_mmus_1666, retro_mmus_2557, retro_mmus_3415, retro_mmus_58,
Pongo abelii ENSPPYG00000016771 ortholog_one2one 1 retrogene
retro_pabe_1680,
Pan troglodytes ENSPTRG00000029547 ortholog_one2one 1 retrogene
retro_ptro_1380,
Rattus norvegicus ENSRNOG00000000199 ortholog_one2many 3 retrogenes
retro_rnor_106, retro_rnor_28, retro_rnor_76,
Ictidomys tridecemlineatus ENSSTOG00000005326 ortholog_one2one 2 retrogenes
retro_itri_199, retro_itri_703,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_190 77.31 100.00
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2. retro_sscr_487 63.03 100.00
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Download FASTA sequences of all ENSSSCG00000004283 retrocopies