Parental gene: | Pin4, ENSRNOG00000050051 |
| Aliases: | None |
| Description: | protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) [Source:MGI Symbol;Acc:MGI:1916963] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | X:72849382..72856079(+) |
>ENSRNOG00000050051
ATGCCGCCGAAGGGGAAAAGTGGTTCTGGAAAAGGAGGGAAAGGAGGTGCAGCCTCTGGGAGCGATAGTGCTGACAAGAA
GTCTCAGGGTCCTAAAGGTGGTGGCAATGCAGTAAAGGTCAGACACATTCTATGTGAAAAACATGGGAAAATCATGGAAG
CTATGGAAAAGTTAAAGTCTGGGATGAGATTCAGTGAAGTGGCCACCCAATACAGTGAGGATAAAGCCAGACAAGGGGGT
GACTTGGGTTGGATGACCAGAGGATCCATGGTGGGGCCATTTCAAGAAGCAGCCTTTGCCTTGCCTGTAAGTGGGATGGA
TAAGCCTGTGTTTACAGACCCACCAGTTAAGACAAAATTTGGATATCATATTATTATGGTTGAAGGGAGAAAATAA
ATGCCGCCGAAGGGGAAAAGTGGTTCTGGAAAAGGAGGGAAAGGAGGTGCAGCCTCTGGGAGCGATAGTGCTGACAAGAA
GTCTCAGGGTCCTAAAGGTGGTGGCAATGCAGTAAAGGTCAGACACATTCTATGTGAAAAACATGGGAAAATCATGGAAG
CTATGGAAAAGTTAAAGTCTGGGATGAGATTCAGTGAAGTGGCCACCCAATACAGTGAGGATAAAGCCAGACAAGGGGGT
GACTTGGGTTGGATGACCAGAGGATCCATGGTGGGGCCATTTCAAGAAGCAGCCTTTGCCTTGCCTGTAAGTGGGATGGA
TAAGCCTGTGTTTACAGACCCACCAGTTAAGACAAAATTTGGATATCATATTATTATGGTTGAAGGGAGAAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 7 .87 RPM |
| SRP017611_kidney | 10 .26 RPM |
| SRP017611_brain | 9 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005801 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032230 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000004992 | ortholog_one2many | 10 retrogenes | |
| Cavia porcellus | ENSCPOG00000011401 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000006985 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000012036 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000102309 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016008 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000018261 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000003611 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001640 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012073 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005287 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000079480 | ortholog_one2one | 8 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000018119 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008715 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000020460 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000003732 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_480 | 84.73 | 97.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_553 | 87.97 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1755 | 86.92 | 97.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2368 | 82.03 | 95.42 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2575 | 97.48 | 90.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_2576 | 97.48 | 90.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000050051 retrocopies