Parental gene:

Fam50a, ENSRNOG00000045790

Aliases:None
Description:Protein Fam50a; Similar to XAP-5 protein (Predicted), isoform CRA_a [Source:UniProtKB/TrEMBL;Acc:G3V9M8]
Organism:Rat (Rattus norvegicus)
Coordinates:4:169674284..169681395(+)


>ENSRNOG00000045790
ATGGCTCAGTACAAGGGCGCTGCAAGTGAGGCGGGACGTGCCATGCACCTAATGAAGAAGAGAGAGAAGCAGCGTGAGCA
AATGGAGCAGATGAAGCAGAGGATTGCAGAGGAGAACATAATGAAATCTAACATTGACAAGAAGTTCTCTGCACACTATG
ATGCTGTGGAAGCAGAGCTCAAGTCCAGTACTGTGGGTCTTGTGACCCTGAATGACATGAAGGCCAAACAGGAGGCACTG
GTGAAGGAGCGAGAAAAGCAGTTGGCAAAAAAGGAACAGTCAAAGGAGCTACAGCTGAAGCTAGAGAAGCTTCGAGAGAA
GGAGCGCAAGAAGGAGGCCAAACGGAAGATCTCTAGCCTGTCCTTCACCTTGGAGGAAGAAGAGGAGGGAGGTGAAGAGG
AAGAAGAGATGGCCATGTATGAGGAAGAACTGGAGAGGGAAGAGATCACCACAAAGAAAAAGAAATTGGGGAAGAACCCT
GATGTGGATACAAGCTTCTTGCCTGACCGGGATCGGGAGGAGGAGGAGAATCGGCTTCGGGAAGAGCTGCGCCAGGAATG
GGAAGCCAAGCAAGAAAAAATCAAGAGTGAAGAGATTGAAATCACCTTTAGTTACTGGGATGGCTCTGGGCACCGGCGCA
CTGTTAAGATGAAGAAGGGCAACACCATGCAGCAGTTCCTGCAGAAAGCACTAGAGATCTTGCGGAAAGACTTCAGTGAG
CTCAGGTCAGCAGGAGTGGAACAGCTCATGTACATCAAGGAGGATTTAATCATCCCCCATCATCACAGCTTCTATGACTT
CATTGTTACCAAGGCGCGAGGAAAAAGTGGGCCACTCTTCAACTTTGATGTTCATGATGATGTTCGACTGCTCAGTGATG
CCACTGTGGAAAAGGATGAGTCACATGCAGGCAAAGTGGTGCTGAGGAGCTGGTATGAGAAGAACAAACACATTTTTCCT
GCTAGTCGCTGGGAGCCCTATGACCCAGAGAAGAAATGGGACAAGTACACGATCCGGTGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_brain 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000273 ortholog_one2many 1 retrogene
retro_amel_15,
Felis catus ENSFCAG00000011399 ortholog_one2many 1 retrogene
retro_fcat_100,
Homo sapiens ENSG00000071859 ortholog_one2many 1 retrogene
retro_hsap_94,
Loxodonta africana ENSLAFG00000008766 ortholog_one2many 1 retrogene
retro_lafr_43,
Myotis lucifugus ENSMLUG00000022234 ortholog_many2many 1 retrogene
retro_mluc_7,
Mustela putorius furo ENSMPUG00000009476 ortholog_many2many 1 retrogene
retro_mputfur_145,
Mus musculus ENSMUSG00000001962 ortholog_one2many 1 retrogene
retro_mmus_103,
Nomascus leucogenys ENSNLEG00000014266 ortholog_one2many 1 retrogene
retro_nleu_109,
Sorex araneus ENSSARG00000006465 ortholog_one2many 1 retrogene
retro_sara_554,
Sus scrofa ENSSSCG00000025303 ortholog_one2many 1 retrogene
retro_sscr_56,
Ictidomys tridecemlineatus ENSSTOG00000004448 ortholog_one2many 10 retrogenes
retro_itri_105, retro_itri_1563, retro_itri_1688, retro_itri_1691, retro_itri_1693, retro_itri_1758, retro_itri_1760, retro_itri_1762, retro_itri_1780, retro_itri_184,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_214 87.17 55.16
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Download FASTA sequences of all ENSRNOG00000045790 retrocopies