Parental gene:

FAM50A, ENSG00000071859

Aliases:FAM50A, 9F, DXS9928E, HXC-26, HXC26, XAP5
Description:family with sequence similarity 50, member A [Source:HGNC Symbol;Acc:18786]
Organism:Human (Homo sapiens)
Coordinates:X:153672472..153679002(+)


>ENSG00000071859
ATGGCTCAATACAAGGGCGCCGCGAGCGAGGCCGGCCGCGCCATGCACCTGATGAAGAAGCGGGAGAAGCAGCGCGAGCA
GATGGAGCAGATGAAGCAGCGCATCGCGGAGGAGAACATCATGAAATCCAACATTGACAAGAAGTTCTCTGCGCACTACG
ACGCGGTGGAGGCAGAGCTCAAGTCCAGCACCGTGGGTCTCGTGACCCTGAATGACATGAAGGCCAAGCAGGAGGCTCTG
GTGAAGGAGCGGGAGAAGCAGCTGGCCAAGAAGGAGCAGTCCAAGGAGCTGCAGATGAAGCTGGAGAAGCTTCGAGAGAA
GGAGCGTAAGAAGGAAGCCAAGCGGAAGATCTCCAGCCTGTCCTTCACCCTGGAGGAGGAAGAAGAGGGAGGCGAGGAGG
AAGAGGAGGCGGCCATGTATGAGGAGGAGATGGAAAGGGAAGAGATCACCACGAAGAAGAGAAAACTGGGGAAGAACCCA
GACGTTGACACAAGCTTCTTGCCTGATCGAGACCGTGAGGAGGAGGAGAATCGGCTTCGGGAAGAGCTGCGGCAGGAGTG
GGAAGCCAAGCAGGAGAAGATCAAGAGTGAGGAGATCGAGATCACCTTCAGCTACTGGGATGGCTCTGGGCACCGGCGGA
CAGTCAAGATGAGAAAGGGCAACACCATGCAGCAGTTCCTGCAGAAGGCGCTCGAGATCCTTCGGAAAGACTTCAGTGAG
CTGAGGTCCGCAGGGGTGGAGCAGCTCATGTACATCAAGGAGGACTTGATCATCCCTCACCATCACAGCTTCTACGACTT
CATCGTCACCAAGGCACGGGGGAAGAGTGGACCACTCTTCAACTTTGATGTTCATGACGATGTGCGGTTGCTCAGTGACG
CCACTGTGGAGAAGGATGAGTCCCATGCAGGCAAGGTGGTGCTGAGGAGCTGGTACGAGAAGAACAAGCACATCTTTCCC
GCCAGCCGCTGGGAACCCTACGACCCTGAAAAGAAGTGGGACAAGTACACGATCCGCTGA

Library Parental gene expression (RPM)
bodymap2_liver 14 .66 RPM
bodymap2_lung 32 .14 RPM
bodymap2_breast 38 .81 RPM
bodymap2_adipose 62 .79 RPM
bodymap2_adrenal 52 .40 RPM
bodymap2_skeletal_muscle 43 .32 RPM
bodymap2_thyroid 51 .77 RPM
bodymap2_prostate 41 .81 RPM
bodymap2_colon 54 .16 RPM
bodymap2_testis 34 .24 RPM
bodymap2_brain 31 .50 RPM
bodymap2_heart 17 .85 RPM
bodymap2_white_blood_cells 22 .96 RPM
bodymap2_lymph_node 50 .27 RPM
bodymap2_ovary 36 .51 RPM
bodymap2_kidney 39 .69 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000273 ortholog_one2one 1 retrogene
retro_amel_15,
Felis catus ENSFCAG00000011399 ortholog_one2one 1 retrogene
retro_fcat_100,
Loxodonta africana ENSLAFG00000008766 ortholog_one2one 1 retrogene
retro_lafr_43,
Myotis lucifugus ENSMLUG00000022234 ortholog_one2many 1 retrogene
retro_mluc_7,
Mustela putorius furo ENSMPUG00000009476 ortholog_one2many 1 retrogene
retro_mputfur_145,
Mus musculus ENSMUSG00000001962 ortholog_one2one 1 retrogene
retro_mmus_103,
Nomascus leucogenys ENSNLEG00000014266 ortholog_one2one 1 retrogene
retro_nleu_109,
Rattus norvegicus ENSRNOG00000045790 ortholog_one2many 1 retrogene
retro_rnor_214,
Sorex araneus ENSSARG00000006465 ortholog_one2one 1 retrogene
retro_sara_554,
Sus scrofa ENSSSCG00000025303 ortholog_one2one 1 retrogene
retro_sscr_56,
Ictidomys tridecemlineatus ENSSTOG00000004448 ortholog_one2one 10 retrogenes
retro_itri_105, retro_itri_1563, retro_itri_1688, retro_itri_1691, retro_itri_1693, retro_itri_1758, retro_itri_1760, retro_itri_1762, retro_itri_1780, retro_itri_184,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_94 87.50 54.28
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Download FASTA sequences of all ENSG00000071859 retrocopies