Parental gene: | Pigx, ENSRNOG00000033623 |
| Aliases: | Pigx, RGD1307289 |
| Description: | phosphatidylinositol-glycan biosynthesis class X protein precursor [Source:RefSeq peptide;Acc:NP_001094121] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 11:75013593..75031091(+) |
>ENSRNOG00000033623
CTGGCTGCCAGCGCCCTTGCCTGGCTGCTCCTCTGGGCAGCTGGGCTGGTCGGCAGGCTCGCCGCAGACATCAGCGACGC
CCGCTTCAGCGATGGTGTAAGGGCCACTTGTTCTGAAATTATTTTGAGGCAAGAATTTTTGAAAGATGGTTTCCACAGAG
ACCTTTTAATAAAAGTGAAATTTGGGGAAAGCATCGAGGACCTACAGACCTGCCGGCTCCTAATCAAACACTACATCCCA
ACAGGACTCTTTGTGGACCCGTACGAGTTGGCTTCATTACGGGAAAGAAACATAACAGAGGCAGTGATGGTATCAGAGAG
TTTTAATCTAGAAGCCCCCAGCTATTTATCCACAGAGTCTGCGGTCCTCATTTATGCCCGGCAGGACGCACAGTGCATCG
ACTGCTTCCAGGCCTTCCTACCTGTGCACTATCGATATCACCGTCCACATAAGAAGGATGGAGACACCCTCATTGTGGTC
AACAACCCTGACTTACTGATGCACTGTGACCAAGAGTTCCCAATTTTGAAATGCTGGGCTCAGTCAGAAGTAGCAGCTCC
TTGTTCTTTGAAGAGTGAGGAGATCTGCCAGTGGAAAAACATGCAGTACAAATCAATACTTAAGAATTTGACAGTGCAGG
TGCCAGTGGGACTGACTATACACACCTCCTTAGTGTGCTCCGTGACACTGCTCATTACGGTTCTGTGTTCTACTCTGATC
CTTTTAGCTGTTTTCAAATACGGCCATTTTTCCCTGAAGCAATTCCAGACTGGGTGTGGTAGCACCTGA
CTGGCTGCCAGCGCCCTTGCCTGGCTGCTCCTCTGGGCAGCTGGGCTGGTCGGCAGGCTCGCCGCAGACATCAGCGACGC
CCGCTTCAGCGATGGTGTAAGGGCCACTTGTTCTGAAATTATTTTGAGGCAAGAATTTTTGAAAGATGGTTTCCACAGAG
ACCTTTTAATAAAAGTGAAATTTGGGGAAAGCATCGAGGACCTACAGACCTGCCGGCTCCTAATCAAACACTACATCCCA
ACAGGACTCTTTGTGGACCCGTACGAGTTGGCTTCATTACGGGAAAGAAACATAACAGAGGCAGTGATGGTATCAGAGAG
TTTTAATCTAGAAGCCCCCAGCTATTTATCCACAGAGTCTGCGGTCCTCATTTATGCCCGGCAGGACGCACAGTGCATCG
ACTGCTTCCAGGCCTTCCTACCTGTGCACTATCGATATCACCGTCCACATAAGAAGGATGGAGACACCCTCATTGTGGTC
AACAACCCTGACTTACTGATGCACTGTGACCAAGAGTTCCCAATTTTGAAATGCTGGGCTCAGTCAGAAGTAGCAGCTCC
TTGTTCTTTGAAGAGTGAGGAGATCTGCCAGTGGAAAAACATGCAGTACAAATCAATACTTAAGAATTTGACAGTGCAGG
TGCCAGTGGGACTGACTATACACACCTCCTTAGTGTGCTCCGTGACACTGCTCATTACGGTTCTGTGTTCTACTCTGATC
CTTTTAGCTGTTTTCAAATACGGCCATTTTTCCCTGAAGCAATTCCAGACTGGGTGTGGTAGCACCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .98 RPM |
| SRP017611_kidney | 9 .84 RPM |
| SRP017611_brain | 9 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003759 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013676 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018455 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003841 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023791 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012329 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1998 | 96.60 | 55.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2555 | 67.55 | 56.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000033623 retrocopies