Parental gene:

Taf7l, ENSRNOG00000026315

Aliases:Taf7l, RGD1564898
Description:transcription initiation factor TFIID subunit 7-like [Source:RefSeq peptide;Acc:NP_001129349]
Organism:Rat (Rattus norvegicus)
Coordinates:X:105183228..105199248(-)


>ENSRNOG00000026315
ATGGAGCGCGGTGAGGAAGCACCCGTTGAGGGTGCTCCGACTGAAAGAGCTCCGGCTGAGGGAGCTCTCGCTGAGGCAGC
TCTCCCCAAGGCAGCTCTCGCTGAGGCGGGGGCCCCCGATATTTCTGAAGCCCCCTCAACACATGCTCCAACATCTGAAG
AAACGGGCCCCAAAGAGCCCCAAGTTCCTATCAGCCTTGGCGCTGAAAGTGCTTGCGACACATCTGACACTGGAGGTGCT
CGAGGCCTAGTGATTCCTGTTCCTAGTAGGGCCGAGCCTCATGGGACCCGCCCGAGTACAGCCCGTGGCAGAGCTCTTCA
GAAGGCTATGCGAGCTATGAGTTTAAGGCATGAGGAGTCTCATGAAATTGAGGAACAGTTCATATTGCGTCTGCCACCGG
TAACTGATGGACATCATGCAGTTGTTCAAGTAGAAAATGTTTCACTGCCTGCTAAGCTGGTTAATTTGCCTTGTGTTATT
GGAAGCCTGAAAACTGTTGATAGAAAAACATTTTATCAGACAGCGGATATTTCTCAGATGCTTGTATGCAGTCCTGAAGG
TGAGCCTCATTCTTCTCCTGAAGAACCAGTTATCTCTACTGGTCCTACTGTTACTGGACATATTGAAGGGAAGGCAGAGA
AAAAAAAGTATAACTGGAAGCACGGCATTACTCCACCACTTAAGAATGTCAGAAAGAAAAGGTTCCGGAAAACAACAAAA
AAGCTCCCAGATGTCAAACAAATGGATGAAATCAACTTCAGTGAGTACACTCAGTCTCCAAGTGTGGAAAAGGAAGTGAA
GAGACTGCTATGCTCAGATGCTGAAGCTGTCAGTGTCCGCTGGGAAGTTGTTGCTGATGATGATACTAAGGAAATAGAAA
GTCAAGGGTGCATCTCAACTACTTCAGGAACCCCACAGATGGGTGGTGCTGGTTCATCAGAATATGATGTGCTTCGGGAG
ATGATGGGCGAGACTGGCAGCAATAGTAATGATGTGGAAGATAAGAATAGCAAAATTGAGGATGAGGATGAGGATGATCA
AGAGGATGAAGATGAAGATGATGGAAATGAAGAAAAAGAGGAGGAGACAGACAATTCTGAAGAAGAGTTAGAAAAGGAGC
TGCAAGCCAAATTTATTCAATCTAGCCTCCATGAAAAAGAACAAGATTACACTTCAATAATCATGGAAATTCAGAAACTG
ATTCATATCAAAGAACAAAAGCTCCAGCAAATTTATAAAAAAGCCCAGCGACAGAAGGATCTCCTTCGGAATGTGGAAAA
CTTGACCCTCAAGAGACATTTCCAGAATGTTTTGGAGAAGCTTAACATACTGGAAAAAGAGAAGTGTGAGCAGATTTATC
ACCTACAGGAACAACTGAAATGTTTCCTGAAGGAGTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_brain 0 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009247 ortholog_one2many 1 retrogene
retro_amel_6,
Bos taurus ENSBTAG00000001979 ortholog_one2many 1 retrogene
retro_btau_107,
Loxodonta africana ENSLAFG00000006941 ortholog_one2many 1 retrogene
retro_lafr_209,
Mus musculus ENSMUSG00000009596 ortholog_one2one 1 retrogene
retro_mmus_72,
Oryctolagus cuniculus ENSOCUG00000004497 ortholog_one2many 1 retrogene
retro_ocun_191,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_134 58.65 72.47
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Download FASTA sequences of all ENSRNOG00000026315 retrocopies