Parental gene:

TAF7L, ENSOCUG00000004497

Aliases:None
Description:TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa [Source:HGNC Symbol;Acc:11548]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:X:88072960..88094247(+)


>ENSOCUG00000004497
ATGGAGTTCCCTGAGGAAGAGCCCATCGATTTGTCAGAAGATGATTTAATACTAATAGCACTAACATCAGAAGAAATGAT
CTACCAACAACAACAAATGCTTGCCAACCAAAATGCGGAAATGGCCCGTTGTCAGAGCCCTGAACATGTTGACGGTCCCA
GAACTGAAAATGCCAGCGGCCCCGGCATGGACAATGCCAGCGGCCTCGGCACTGAAAACGCCAGAGGTCCCAGCAGGGAA
AGTGCCAGCGACCCCAGCACGGAAAGTGCCAGCGACCCCAGCAGAGAAAGTGCCAGCGACCCCAGCAGGGAAAGTGCCAG
CGACCCCAGCAGGGAAAGTGCCAGCGACCCCAGCAGGGAAAGTGCCAGCGACCCCAGCAGAGAAAGTGCCAGCGACCCCA
GCAGGGAAAGTGCCAGCGACCCCAGCAGGGAAAATGTTGCTGACCATAGCACCGCAACAACCAGCAACGAAGTCGCTGGA
CTTCAGGTTGACCAAGGCCCTGGAACTGATGCTGACGGAGGTGCCCAAGCTGCTGCCCAAACTCCTTCCGAAAACCTCCC
AGAAAAGACAGACATGACTAAAAGCCAGGATGAAGTTCCTCATGAACTTGAGAACCAGTTTATATTACGTGTGCCTCCGG
AATATGCTTCTACTATCAGGAAAATGGTGCGTTCTAGAGATGTCGCCATGAAGGATAAACTAAAAATTGACCTCTCTCCT
GATGGGCGCAGAGCAACCGTTGAAGTGGACAAGGTCTCACTGGCTGCCAAGCTGGTTGATTTGCCCTGTGTTGTTGGAAG
CATGAAAACTTTTGATAAAAAAACCTTTTTTACAACAGCAGACATTTCCCAGATGCTTGTGTGCACTACTGCTGATGATC
AGCCGCAGTCTTCTCCAGAGGAACCAGTTGCCTCTGCTGATCTTGATTTAATGGATATAAGTGAGAGAGAGAAGAAGAAG
AGTTATACCTGGAAACATGGCATTACTCCACCACTTAAGAATGTCAGAAAGAAAAGATTCCGGAAAACAACAAAAAAGAG
GTACGTTGATTCTCCAGCTGTGGAAAAGGAAGTGAAGAGACTGCTGTATTCAGATGCTGAAGCCATCAGTGCCCGATGGG
AAGTCATTGCCGAAGGTGAAGACAAGGAAATTGAAAGTCAAGGCTGCATTTCAGGCTTCAAGATATCCCCAGGATCAAGC
GGCGAGAAGCGTGGTCGTATCTCATCAGAATCAATAGAATATAATATTCTTCGGGAGATGTTCAGTTTTAGTATTGATAA
TGAGGAGGAAGAGGAGACATCGTCAACAACTGATTGTGAAGAGGATCTGGAAAGGGAGCTACAAGCCAAGTTGCTTGAAT
CTAACCTGTACAAGTCAAAGGAAGCTTCCAATGCCCTAGTCCTAACAATTCAGAAGCAGATTCATTTCTTGGAGAGAAAG
CTCCGTAACATTCAGTGCCAAACACAAAGACAGAATCATCTCTTCATGAAAGTGGAAAGCCTGCCACTCAAGAACCACTT
AAAGTCTGTGCTGGAGAAGCTTAACTTAGAAGAGAAACAAAGAAATGAGCAGCTCATTTCCCTGCAGGAGAAACTGAAAT
GTATTCTGAAGAAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 0 .08 RPM
SRP017611_kidney 0 .20 RPM
SRP017611_brain 0 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009247 ortholog_one2one 1 retrogene
retro_amel_6,
Bos taurus ENSBTAG00000001979 ortholog_one2one 1 retrogene
retro_btau_107,
Loxodonta africana ENSLAFG00000006941 ortholog_one2one 1 retrogene
retro_lafr_209,
Mus musculus ENSMUSG00000009596 ortholog_one2many 1 retrogene
retro_mmus_72,
Rattus norvegicus ENSRNOG00000026315 ortholog_one2many 1 retrogene
retro_rnor_134,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_191 52.26 64.50
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Download FASTA sequences of all ENSOCUG00000004497 retrocopies