Parental gene: | Aldoa, ENSRNOG00000023647 |
| Aliases: | Aldoa, Aldo1, RNALDOG5 |
| Description: | Fructose-bisphosphate aldolase A [Source:UniProtKB/Swiss-Prot;Acc:P05065] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:205208254..205212211(-) |
>ENSRNOG00000023647
ATGCCCCACCCATACCCAGCACTGACCCCGGAGCAGAAGAAGGAGCTGGCTGACATCGCTCACCGAATTGTAGCTCCGGG
CAAGGGCATCCTGGCTGCAGACGAGTCCACTGGAAGCATTGCCAAGCGCCTGCAGTCCATTGGCACCGAGAACACCGAGG
AGAACAGGCGCTTCTACCGCCAACTGCTGCTGACTGCCGATGACCGTGTGAATCCCTGCATTGGAGGGGTGATCCTTTTC
CACGAGACACTGTACCAGAAGGCAGATGATGGCCGTCCCTTCCCCCAAGTTATCAAGTCCAAGGGTGGTGTTGTGGGCAT
TAAGGTAGATAAGGGTGTAGTGCCCCTGGCTGGAACCAATGGCGAGACCACTACTCAAGGGCTGGACGGGCTGTCTGAGC
GCTGTGCCCAGTATAAGAAGGATGGAGCCGACTTTGCCAAGTGGCGCTGTGTGCTAAAGATTGGGGAGCATACTCCCTCG
TCCCTCGCCATCATGGAAAATGCCAATGTTCTGGCCCGTTACGCCAGCATCTGCCAGCAGAATGGCATTGTACCCATTGT
GGAGCCTGAAATTCTCCCTGATGGGGACCATGACTTGAAGCGCTGCCAGTATGTAACTGAGAAGGTACTGGCAGCTGTCT
ACAAGGCTCTGAGTGACCACCATGTCTATCTGGAAGGCACACTGCTGAAGCCCAACATGGTCACCCCTGGCCATGCTTGC
ACCCAGAAATTTTCCAATGAGGAAATTGCCATGGCAACCGTCACAGCACTTCGTCGAACAGTGCCCCCTGCCGTCCCTGG
GGTCACTTTCCTGTCTGGAGGGCAGAGTGAGGAAGAGGCATCCATCAACCTCAATGCTATCAACAAGTGTCCCCTGCTGA
AGCCATGGGCCTTGACTTTCTCCTATGGCCGAGCCCTGCAGGCCTCTGCTCTAAAGGCTTGGGGTGGGAAGAAGGAGAAC
CTGAAGGCAGCCCAGGAGGAGTACATCAAGCGAGCCCTGGCCAACAGCCTCGCTTGTCAAGGAAAGTACACTCCAAGTGG
CCAGTCTGGAGCCGCAGCCAGTGAATCTCTCTTCATCTCTAACCATGCCTACTAA
ATGCCCCACCCATACCCAGCACTGACCCCGGAGCAGAAGAAGGAGCTGGCTGACATCGCTCACCGAATTGTAGCTCCGGG
CAAGGGCATCCTGGCTGCAGACGAGTCCACTGGAAGCATTGCCAAGCGCCTGCAGTCCATTGGCACCGAGAACACCGAGG
AGAACAGGCGCTTCTACCGCCAACTGCTGCTGACTGCCGATGACCGTGTGAATCCCTGCATTGGAGGGGTGATCCTTTTC
CACGAGACACTGTACCAGAAGGCAGATGATGGCCGTCCCTTCCCCCAAGTTATCAAGTCCAAGGGTGGTGTTGTGGGCAT
TAAGGTAGATAAGGGTGTAGTGCCCCTGGCTGGAACCAATGGCGAGACCACTACTCAAGGGCTGGACGGGCTGTCTGAGC
GCTGTGCCCAGTATAAGAAGGATGGAGCCGACTTTGCCAAGTGGCGCTGTGTGCTAAAGATTGGGGAGCATACTCCCTCG
TCCCTCGCCATCATGGAAAATGCCAATGTTCTGGCCCGTTACGCCAGCATCTGCCAGCAGAATGGCATTGTACCCATTGT
GGAGCCTGAAATTCTCCCTGATGGGGACCATGACTTGAAGCGCTGCCAGTATGTAACTGAGAAGGTACTGGCAGCTGTCT
ACAAGGCTCTGAGTGACCACCATGTCTATCTGGAAGGCACACTGCTGAAGCCCAACATGGTCACCCCTGGCCATGCTTGC
ACCCAGAAATTTTCCAATGAGGAAATTGCCATGGCAACCGTCACAGCACTTCGTCGAACAGTGCCCCCTGCCGTCCCTGG
GGTCACTTTCCTGTCTGGAGGGCAGAGTGAGGAAGAGGCATCCATCAACCTCAATGCTATCAACAAGTGTCCCCTGCTGA
AGCCATGGGCCTTGACTTTCTCCTATGGCCGAGCCCTGCAGGCCTCTGCTCTAAAGGCTTGGGGTGGGAAGAAGGAGAAC
CTGAAGGCAGCCCAGGAGGAGTACATCAAGCGAGCCCTGGCCAACAGCCTCGCTTGTCAAGGAAAGTACACTCCAAGTGG
CCAGTCTGGAGCCGCAGCCAGTGAATCTCTCTTCATCTCTAACCATGCCTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 36 .38 RPM |
| SRP017611_kidney | 762 .30 RPM |
| SRP017611_brain | 1073 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008221 | ortholog_many2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006874 | ortholog_many2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007434 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019230 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000149925 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013979 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011210 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000983 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015696 | ortholog_many2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000030695 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002152 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006329 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009760 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007244 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007983 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_226 | 94.51 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_536 | 82.77 | 79.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1343 | 95.69 | 69.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1541 | 90.62 | 69.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_1796 | 54.10 | 64.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_1807 | 68.12 | 55.22 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_rnor_2791 | 74.48 | 65.11 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000023647 retrocopies