Parental gene:

Rbm8a, ENSRNOG00000021215

Aliases:Rbm8a, Rbm8
Description:RNA-binding protein 8A [Source:UniProtKB/Swiss-Prot;Acc:Q27W01]
Organism:Rat (Rattus norvegicus)
Coordinates:2:218242219..218244257(+)


>ENSRNOG00000021215
ATGGCGGACGTGCTGGATCTTCACGAGGCCGGGGGCGAGGATTTCGCCATGGATGAGGATGGTGACGAAAGCATCCACAA
ACTAAAAGAAAAAGCGAAGAAACGGAAGGGCCGCGGTTTTGGTTCTGAAGAGGGGTCCCGAGCGCGGATGCGGGAAGATT
ATGACAGTGTGGAGCAGGATGGCGATGAACCTGGACCACAGCGCTCTGTTGAAGGTTGGATTCTCTTTGTCACTGGAGTC
CACGAAGAAGCCACTGAAGAAGATATCCATGACAAGTTCGCTGAATATGGGGAAATAAAAAATATCCACCTGAATTTGGA
CAGGCGCACGGGATACTTGAAGGGGTATACTCTAGTTGAGTATGAAACATACAAAGAAGCTCAGGCTGCCATGGAGGGAC
TAAATGGTCAAGATTTGATGGGACAGCCAATCAGTGTTGACTGGTGTTTTGTTCGTGGTCCACCAAAGGGCAAGAGGAGA
GGTGGCCGAAGACGAAGCAGGAGTCCAGACCGAAGACGCCGATGA

Library Parental gene expression (RPM)
SRP017611_liver 12 .91 RPM
SRP017611_kidney 22 .33 RPM
SRP017611_brain 18 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000016021 possible_ortholog 1 retrogene
retro_dnov_47,
Echinops telfairi ENSETEG00000008411 ortholog_one2one 1 retrogene
retro_etel_1200,
Felis catus ENSFCAG00000026379 ortholog_one2one 1 retrogene
retro_fcat_955,
Homo sapiens ENSG00000131795 ortholog_one2one 1 retrogene
retro_hsap_1349,
Macropus eugenii ENSMEUG00000016058 ortholog_one2one 2 retrogenes
retro_meug_873, retro_meug_952,
Myotis lucifugus ENSMLUG00000017436 ortholog_one2many 2 retrogenes
retro_mluc_179, retro_mluc_1932,
Mus musculus ENSMUSG00000038374 possible_ortholog 2 retrogenes
retro_mmus_137, retro_mmus_776,
Otolemur garnettii ENSOGAG00000000202 ortholog_one2one 2 retrogenes
retro_ogar_2694, retro_ogar_771,
Ochotona princeps ENSOPRG00000013316 ortholog_one2one 2 retrogenes
retro_opri_1146, retro_opri_659,
Sorex araneus ENSSARG00000013289 ortholog_one2one 2 retrogenes
retro_sara_116, retro_sara_217,
Tupaia belangeri ENSTBEG00000014947 ortholog_one2one 2 retrogenes
retro_tbel_3548, retro_tbel_804,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1434 83.04 64.37
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2. retro_rnor_1828 77.78 82.18
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Download FASTA sequences of all ENSRNOG00000021215 retrocopies