Parental gene: | Ube2i, ENSRNOG00000017907 |
| Aliases: | Ube2i, UbcE2A |
| Description: | SUMO-conjugating enzyme UBC9 [Source:UniProtKB/Swiss-Prot;Acc:P63281] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:14437608..14453131(-) |
>ENSRNOG00000017907
ATGTCGGGGATTGCCCTCAGCCGACTTGCGCAGGAGAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTGGCTGT
CCCAACAAAGAACCCTGATGGCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGAAAGAAGGGGACTCCGTGGG
AAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCACCA
CTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGCGGCCAGCTAT
TACGATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCT
ATACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAA
ATGTCGGGGATTGCCCTCAGCCGACTTGCGCAGGAGAGGAAAGCCTGGAGGAAGGACCACCCTTTTGGCTTTGTGGCTGT
CCCAACAAAGAACCCTGATGGCACGATGAACCTGATGAACTGGGAGTGTGCTATCCCTGGAAAGAAGGGGACTCCGTGGG
AAGGAGGCTTGTTCAAGCTACGGATGCTTTTCAAAGATGACTATCCGTCCTCACCACCAAAATGTAAATTTGAGCCACCA
CTGTTTCATCCAAACGTGTATCCTTCTGGCACAGTGTGCCTGTCCATCCTGGAGGAAGACAAGGACTGGCGGCCAGCTAT
TACGATCAAACAGATCTTATTAGGAATACAAGAACTTCTAAATGAACCAAATATTCAAGACCCAGCTCAAGCAGAGGCCT
ATACAATTTACTGCCAAAACAGAGTGGAATATGAGAAAAGGGTTCGAGCACAAGCGAAGAAGTTTGCCCCCTCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .20 RPM |
| SRP017611_kidney | 15 .35 RPM |
| SRP017611_brain | 17 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007721 | ortholog_one2many | 1 retrogene | |
| Bos taurus | ENSBTAG00000038866 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000031449 | ortholog_one2one | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013249 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010431 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015831 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027291 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018318 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008229 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003654 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000015763 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000015120 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008525 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001428 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000007034 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021560 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010233 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_708 | 100.00 | 95.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_832 | 79.49 | 98.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1051 | 89.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1448 | 89.73 | 91.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_1764 | 77.00 | 62.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_1913 | 87.63 | 60.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_rnor_2036 | 91.14 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_rnor_2147 | 99.08 | 68.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_rnor_2301 | 89.53 | 54.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_rnor_2423 | 66.29 | 55.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_rnor_2927 | 83.21 | 82.28 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000017907 retrocopies