Parental gene:

UBE2I, ENSMMUG00000003654

Aliases:None
Description:SUMO-conjugating enzyme UBC9 [Source:RefSeq peptide;Acc:NP_001181765]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:20:1281740..1293620(+)


>ENSMMUG00000003654
ATGTCGGGGATCGCCCTCAGCAGACTCGCCCAGGAGAGGAAAGCATGGAGGAAAGACCACCCGTTTGGTTTCGTGGCTGT
CCCAACAAAAAATCCCGATGGCACGATGAACCTCATGAACTGGGAGTGCGCCATTCCAGGAAAGAAAGGGACTCCGTGGG
AAGGAGGCTTGTTTAAACTACGGATGCTTTTCAAAGATGATTATCCGTCTTCACCACCAAAATGTAAATTCGAACCACCA
TTATTTCACCCGAATGTGTACCCCTCGGGGACAGTGTGCCTGTCCATCTTAGAGGAGGACAAGGACTGGAGGCCAGCCAT
CACAATCAAACAGATCCTATTAGGAATACAGGAACTTCTAAATGAACCAAATATCCAAGATCCAGCTCAAGCAGAGGCCT
ACACGATTTACTGGTTAGTAGCAGCCCTCGCCCCGCTGCTGGCAGCTCCTCTCCATCCCAGCCAAGGCCGCCTGGCAGGA
GGGGAGTGGAGCACACAGGCTCACCCTAGAGACAGCCAGGGTCCGCACCTCGGGGAAGGTCGGGGCATA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 37 .84 RPM
SRP007412_brain 33 .17 RPM
SRP007412_cerebellum 35 .00 RPM
SRP007412_heart 19 .73 RPM
SRP007412_kidney 23 .12 RPM
SRP007412_liver 14 .37 RPM
SRP007412_testis 21 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007721 ortholog_one2many 1 retrogene
retro_amel_1843,
Bos taurus ENSBTAG00000038866 ortholog_one2one 1 retrogene
retro_btau_1470,
Canis familiaris ENSCAFG00000031449 ortholog_one2one 4 retrogenes
retro_cfam_1363, retro_cfam_1991, retro_cfam_2090, retro_cfam_541,
Callithrix jacchus ENSCJAG00000013249 ortholog_one2one 1 retrogene
retro_cjac_2914,
Cavia porcellus ENSCPOG00000010431 ortholog_one2one 1 retrogene
retro_cpor_156,
Equus caballus ENSECAG00000015831 ortholog_one2one 1 retrogene
retro_ecab_350,
Felis catus ENSFCAG00000027291 ortholog_one2one 2 retrogenes
retro_fcat_1994, retro_fcat_873,
Loxodonta africana ENSLAFG00000018318 ortholog_one2one 1 retrogene
retro_lafr_541,
Myotis lucifugus ENSMLUG00000008229 ortholog_one2one 2 retrogenes
retro_mluc_1112, retro_mluc_1327,
Mustela putorius furo ENSMPUG00000015763 ortholog_one2one 1 retrogene
retro_mputfur_1234,
Mus musculus ENSMUSG00000015120 ortholog_one2one 4 retrogenes
retro_mmus_1341, retro_mmus_1997, retro_mmus_3182, retro_mmus_3419,
Nomascus leucogenys ENSNLEG00000008525 ortholog_one2one 1 retrogene
retro_nleu_1298,
Otolemur garnettii ENSOGAG00000001428 ortholog_one2one 4 retrogenes
retro_ogar_2367, retro_ogar_2731, retro_ogar_548, retro_ogar_641,
Rattus norvegicus ENSRNOG00000017907 ortholog_one2one 11 retrogenes
retro_rnor_1051, retro_rnor_1448, retro_rnor_1764, retro_rnor_1913, retro_rnor_2036, retro_rnor_2147, retro_rnor_2301, retro_rnor_2423, retro_rnor_2927, retro_rnor_708, retro_rnor_832,
Sarcophilus harrisii ENSSHAG00000007034 ortholog_one2one 1 retrogene
retro_shar_218,
Sus scrofa ENSSSCG00000021560 ortholog_one2one 1 retrogene
retro_sscr_319,
Ictidomys tridecemlineatus ENSSTOG00000010233 ortholog_one2one 3 retrogenes
retro_itri_1341, retro_itri_1459, retro_itri_1601,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_981 57.29 58.86
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Download FASTA sequences of all ENSMMUG00000003654 retrocopies