Parental gene: | Sord, ENSRNOG00000017291 |
| Aliases: | None |
| Description: | Sorbitol dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:P27867] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:120716969..120746949(+) |
>ENSRNOG00000017291
ATGGCAGCTCCTGCTAAGGGCGAGAACCTGTCCCTGGTGGTGCACGGACCTGGAGACATTCGCCTGGAGAACTACCCAAT
CCCTGAGCTGGGCCCAAATGATGTGTTACTAAAGATGCATTCGGTGGGGATCTGTGGCTCGGATGTTCACTACTGGGAGC
ATGGCCGAATTGGGGACTTCGTTGTGAAAAAGCCAATGGTGCTTGGGCATGAAGCTGCTGGAACAGTCACAAAAGTGGGA
CCGATGGTGAAACATCTAAAACCAGGAGATCGGGTGGCCATCGAGCCTGGCGTTCCCCGAGAAATAGATGAATTCTGCAA
GATCGGCCGATACAATCTGACGCCATCCATCTTCTTCTGTGCCACGCCCCCAGATGATGGGAACCTCTGCCGCTTCTACA
AGCACAGCGCTGACTTCTGCTACAAGCTTCCTGATAGTGTCACCTTTGAAGAAGGGGCCCTGATTGAGCCTCTCTCTGTG
GGGATCTATGCCTGCCGTCGAGGTTCGGTTTCCCTGGGGAACAAGGTCCTTGTGTGTGGAGCTGGGCCAATTGGGATAGT
CACTTTGCTTGTGGCCAAAGCAATGGGAGCTTCTCAAGTAGTGGTGATTGACCTCTCTGCTTCTCGGTTAGCCAAGGCCA
AGGAAGTTGGAGCAGACTTTACCATCCAGGTTGCCAAAGAGACCCCTCACGACATTGCCAAGAAGGTGGAAAGTGTGCTG
GGGAGCAAGCCAGAGGTCACCATCGAATGCACGGGAGCGGAGTCCTCTGTCCAGACGGGCATCTATGCCACTCACTCTGG
CGGGACCTTGGTGGTTGTGGGAATGGGCCCCGAGATGATCAATTTACCCCTAGTGCACGCAGCTGTGCGGGAGGTGGACA
TCAAAGGCGTGTTTCGATACTGCAACACGTGGCCGATGGCAGTTTCCATGCTTGCATCGAAGACTTTGAATGTAAAGCCC
TTAGTGACCCATAGGTTCCCCCTGGAGAAGGCTGTAGAAGCCTTTGAAACAGCCAAAAAGGGACTGGGGCTGAAAGTTAT
GATCAAGTGTGACCCCAATGACCAGAACCCCTAA
ATGGCAGCTCCTGCTAAGGGCGAGAACCTGTCCCTGGTGGTGCACGGACCTGGAGACATTCGCCTGGAGAACTACCCAAT
CCCTGAGCTGGGCCCAAATGATGTGTTACTAAAGATGCATTCGGTGGGGATCTGTGGCTCGGATGTTCACTACTGGGAGC
ATGGCCGAATTGGGGACTTCGTTGTGAAAAAGCCAATGGTGCTTGGGCATGAAGCTGCTGGAACAGTCACAAAAGTGGGA
CCGATGGTGAAACATCTAAAACCAGGAGATCGGGTGGCCATCGAGCCTGGCGTTCCCCGAGAAATAGATGAATTCTGCAA
GATCGGCCGATACAATCTGACGCCATCCATCTTCTTCTGTGCCACGCCCCCAGATGATGGGAACCTCTGCCGCTTCTACA
AGCACAGCGCTGACTTCTGCTACAAGCTTCCTGATAGTGTCACCTTTGAAGAAGGGGCCCTGATTGAGCCTCTCTCTGTG
GGGATCTATGCCTGCCGTCGAGGTTCGGTTTCCCTGGGGAACAAGGTCCTTGTGTGTGGAGCTGGGCCAATTGGGATAGT
CACTTTGCTTGTGGCCAAAGCAATGGGAGCTTCTCAAGTAGTGGTGATTGACCTCTCTGCTTCTCGGTTAGCCAAGGCCA
AGGAAGTTGGAGCAGACTTTACCATCCAGGTTGCCAAAGAGACCCCTCACGACATTGCCAAGAAGGTGGAAAGTGTGCTG
GGGAGCAAGCCAGAGGTCACCATCGAATGCACGGGAGCGGAGTCCTCTGTCCAGACGGGCATCTATGCCACTCACTCTGG
CGGGACCTTGGTGGTTGTGGGAATGGGCCCCGAGATGATCAATTTACCCCTAGTGCACGCAGCTGTGCGGGAGGTGGACA
TCAAAGGCGTGTTTCGATACTGCAACACGTGGCCGATGGCAGTTTCCATGCTTGCATCGAAGACTTTGAATGTAAAGCCC
TTAGTGACCCATAGGTTCCCCCTGGAGAAGGCTGTAGAAGCCTTTGAAACAGCCAAAAAGGGACTGGGGCTGAAAGTTAT
GATCAAGTGTGACCCCAATGACCAGAACCCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 603 .05 RPM |
| SRP017611_kidney | 491 .62 RPM |
| SRP017611_brain | 24 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000025496 | ortholog_one2many | 1 retrogene | |
| Ciona intestinalis | ENSCING00000021861 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010850 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000027227 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1272 | 79.33 | 57.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1813 | 76.62 | 56.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2021 | 70.94 | 88.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2022 | 70.94 | 88.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2023 | 70.94 | 88.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_2024 | 70.94 | 88.24 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_rnor_2857 | 75.61 | 79.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000017291 retrocopies