Parental gene: | Ns5atp9, ENSRNOG00000016561 |
| Aliases: | None |
| Description: | PCNA-associated factor [Source:UniProtKB/Swiss-Prot;Acc:Q6RIA2] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 8:71186634..71199152(+) |
>ENSRNOG00000016561
ATGGTTCGGACCAAAGCAAACTACGTCCCAGGAGCCTACAGAAAAGTGGTGGCTTCTCAAGCCCCTAGGAAGGTGCTTGG
CTCCTCCACCTTTGTCACCAATTCTTCCGGTTCGTCGAGAAAAGCTGAAAATAAGTATGCTGGAGGGAACCCAGTCTGTG
TGCGCCCAACTCCCAAGTGGCAAAAAGGCATCGGGGAATTCTTCAGGTTGTCCCCTAAAGATTCTAAAAAAGAAAACCAG
ATTCCTGAAGAAGCAGGAAGCAGTGGCTTAGGAAAAGCAAAGAGAAAAGCATGTCCTTTGCAACCTGATCACAGAGATGA
TGAAAATGAATAG
ATGGTTCGGACCAAAGCAAACTACGTCCCAGGAGCCTACAGAAAAGTGGTGGCTTCTCAAGCCCCTAGGAAGGTGCTTGG
CTCCTCCACCTTTGTCACCAATTCTTCCGGTTCGTCGAGAAAAGCTGAAAATAAGTATGCTGGAGGGAACCCAGTCTGTG
TGCGCCCAACTCCCAAGTGGCAAAAAGGCATCGGGGAATTCTTCAGGTTGTCCCCTAAAGATTCTAAAAAAGAAAACCAG
ATTCCTGAAGAAGCAGGAAGCAGTGGCTTAGGAAAAGCAAAGAGAAAAGCATGTCCTTTGCAACCTGATCACAGAGATGA
TGAAAATGAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .54 RPM |
| SRP017611_kidney | 0 .56 RPM |
| SRP017611_brain | 0 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000010763 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000006482 | ortholog_one2one | 3 retrogenes | |
| Dipodomys ordii | ENSDORG00000014912 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000027710 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000040204 | ortholog_one2one | 7 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003982 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000019643 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013732 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1162 | 83.33 | 92.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1412 | 83.00 | 90.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2595 | 93.07 | 90.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2624 | 60.87 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2698 | 81.98 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000016561 retrocopies