Parental gene: | Gtpbp4, ENSRNOG00000016217 |
| Aliases: | None |
| Description: | nucleolar GTP-binding protein 1 [Source:RefSeq peptide;Acc:NP_446141] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 17:64881146..64916648(-) |
>ENSRNOG00000016217
ATGGCGCATTACAACTTCAAGAAGATTACGGTGGTGCCGTCAGCCAAGGACTTTATTGACCTGACATTATCCAAGACACA
ACGAAAGACTCCAACGGTTATTCATAAACATTATCAAATTCATCGAATTCGACATTTTTATATGAGAAAAGTCAAATTTA
CTCAACAGAATTATCATGACAGACTGTCACAGATTCTGTCCGATTTCCCCAAATTGGATGATATCCATCCATTTTATGCT
GACTTGATGAATATTCTCTATGACAAGGATCACTACAAGTTGGCTCTAGGACAAATAAATATTGCCAAAAACTTGGTGGA
CAATGTTGCTAAAGATTACGTGCGACTTATGAAGTATGGTGATTCTCTCTACCGATGCAAGCAGCTGAAGCGCGCTGCCC
TGGGGCGAATGTGTACGATTATCAAGAGGCAGAGGCAGAGTTTGGAGTACTTGGAACAAGTACGTCAACATCTATCCCGC
TTGCCAACCATTGATCCAAATACAAGGACTCTACTTTTGTGTGGGTATCCAAATGTTGGGAAATCCAGCTTCATCAATAA
GGTGACAAGAGCAGATGTGGATGTTCAGCCCTATGCATTTACCACCAAGTCTCTGTTTGTCGGGCACATGGATTATAAGT
ATCTGCGCTGGCAGGTTGTAGATACTCCAGGGATTTCGGATCATCCTTTGGAGGATCGGAACACCATTGAGATGCAGGCC
ATCACAGCCCTGGCCCAGCCCCGAGCTGCAGTTCTGTATGTGATGGATTTGTCTGAGCAGTGTGGACATGGGTTGAAGGA
GCAATTAGAACTCTTCCAGAATATCAGACCCCTGTTTATCAACAAGCCTCTTATTGTTGTAGCAAACAAATGTGATGTGA
AGAGAATAGCTGAACTTTCTGAAGAAGATCAGAAAATATTTCTAGACTTGCAGGCTGAAGGATTTCCTGTCATCGAGACC
AGCACCCTGACTGAGGAAGGTGTCATTCAAGTTAAAACGGAGGCTTGTGATAGGCTTTTGGCTCACCGAGTAGAAACGAA
AATGAAAGGAAATAAAGTGAATGAGGTTCTGAACAGATTGCACTTAGCTGTGCCCAACAAGAGAGATGACAAGGAGAGAC
CCCCGTTCATCCCAGAAGGAGTGGTAGCTCGTCGGAAGAGAATGGAGATCGCAGAACCCAAGAAGAAGAGGGAACGAGAT
CTTGAGCTGGAAATGGGAGATGATTATATTTTGGATCTTCAGAAATACTGGGACTTAATGAATTCATCTGAGAAGTATGA
TAAGATACCAGAGATTTGGGAAGGCCACAATGTTGCTGATTATATCGATCCTGCTATCATGAAGAAATTAGAAGAGTTGG
AAAAGGAAGAAGAGCTCCGAACAGCTGCTGGGGAGTATGACAGTGAGTCTGAGAGTGAAGACGAGGAAATGGTGGAAATC
CGACAGCTGGCAAAACAAATTAGAGAGAAGAAGAAGTTGAAAATTCTACAGTCCAAAGAAAAGAACACACAGGGACCCCG
CATGCCCCGGACTGCTAAGAAGGTTCAACGGGCAGATTTAGAGAATGAGATGCGTAGTCTTGGCGTGGACATGGATGATA
AAGACAATGCCCACTATGCAGTCCAGGCCAGAAGATCTCGGAGTGTCACCAGGAAAAGAAAACGAGAAGAGTCTGTTCCT
CCCTCTTCCATAGCCCGCAGTCGCAGTCGGAGTTGCTCTAAAACGCCACGTGATGTTTCTGGTCTTCGGGATGTCAAGAT
GGTGAAGAAAGCCAAGACCATGATGAAGAAAGCCCAGAAGAAGATGAATCGCTTGGGGAAGAAGGGGGAAGCAGATAGGC
ATGTGTTTGATATGAAGCCCAAGCACCTACTCTCTGGGAAGAGGAAAGCTGGTAAAAAGGACAGGAGATAA
ATGGCGCATTACAACTTCAAGAAGATTACGGTGGTGCCGTCAGCCAAGGACTTTATTGACCTGACATTATCCAAGACACA
ACGAAAGACTCCAACGGTTATTCATAAACATTATCAAATTCATCGAATTCGACATTTTTATATGAGAAAAGTCAAATTTA
CTCAACAGAATTATCATGACAGACTGTCACAGATTCTGTCCGATTTCCCCAAATTGGATGATATCCATCCATTTTATGCT
GACTTGATGAATATTCTCTATGACAAGGATCACTACAAGTTGGCTCTAGGACAAATAAATATTGCCAAAAACTTGGTGGA
CAATGTTGCTAAAGATTACGTGCGACTTATGAAGTATGGTGATTCTCTCTACCGATGCAAGCAGCTGAAGCGCGCTGCCC
TGGGGCGAATGTGTACGATTATCAAGAGGCAGAGGCAGAGTTTGGAGTACTTGGAACAAGTACGTCAACATCTATCCCGC
TTGCCAACCATTGATCCAAATACAAGGACTCTACTTTTGTGTGGGTATCCAAATGTTGGGAAATCCAGCTTCATCAATAA
GGTGACAAGAGCAGATGTGGATGTTCAGCCCTATGCATTTACCACCAAGTCTCTGTTTGTCGGGCACATGGATTATAAGT
ATCTGCGCTGGCAGGTTGTAGATACTCCAGGGATTTCGGATCATCCTTTGGAGGATCGGAACACCATTGAGATGCAGGCC
ATCACAGCCCTGGCCCAGCCCCGAGCTGCAGTTCTGTATGTGATGGATTTGTCTGAGCAGTGTGGACATGGGTTGAAGGA
GCAATTAGAACTCTTCCAGAATATCAGACCCCTGTTTATCAACAAGCCTCTTATTGTTGTAGCAAACAAATGTGATGTGA
AGAGAATAGCTGAACTTTCTGAAGAAGATCAGAAAATATTTCTAGACTTGCAGGCTGAAGGATTTCCTGTCATCGAGACC
AGCACCCTGACTGAGGAAGGTGTCATTCAAGTTAAAACGGAGGCTTGTGATAGGCTTTTGGCTCACCGAGTAGAAACGAA
AATGAAAGGAAATAAAGTGAATGAGGTTCTGAACAGATTGCACTTAGCTGTGCCCAACAAGAGAGATGACAAGGAGAGAC
CCCCGTTCATCCCAGAAGGAGTGGTAGCTCGTCGGAAGAGAATGGAGATCGCAGAACCCAAGAAGAAGAGGGAACGAGAT
CTTGAGCTGGAAATGGGAGATGATTATATTTTGGATCTTCAGAAATACTGGGACTTAATGAATTCATCTGAGAAGTATGA
TAAGATACCAGAGATTTGGGAAGGCCACAATGTTGCTGATTATATCGATCCTGCTATCATGAAGAAATTAGAAGAGTTGG
AAAAGGAAGAAGAGCTCCGAACAGCTGCTGGGGAGTATGACAGTGAGTCTGAGAGTGAAGACGAGGAAATGGTGGAAATC
CGACAGCTGGCAAAACAAATTAGAGAGAAGAAGAAGTTGAAAATTCTACAGTCCAAAGAAAAGAACACACAGGGACCCCG
CATGCCCCGGACTGCTAAGAAGGTTCAACGGGCAGATTTAGAGAATGAGATGCGTAGTCTTGGCGTGGACATGGATGATA
AAGACAATGCCCACTATGCAGTCCAGGCCAGAAGATCTCGGAGTGTCACCAGGAAAAGAAAACGAGAAGAGTCTGTTCCT
CCCTCTTCCATAGCCCGCAGTCGCAGTCGGAGTTGCTCTAAAACGCCACGTGATGTTTCTGGTCTTCGGGATGTCAAGAT
GGTGAAGAAAGCCAAGACCATGATGAAGAAAGCCCAGAAGAAGATGAATCGCTTGGGGAAGAAGGGGGAAGCAGATAGGC
ATGTGTTTGATATGAAGCCCAAGCACCTACTCTCTGGGAAGAGGAAAGCTGGTAAAAAGGACAGGAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .72 RPM |
| SRP017611_kidney | 32 .94 RPM |
| SRP017611_brain | 9 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008494 | ortholog_many2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000013736 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014713 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010042 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1961 | 88.36 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2882 | 95.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000016217 retrocopies