Parental gene:

Mfap1a, ENSRNOG00000015984

Aliases:Mfap1a, RGD1562232
Description:microfibrillar-associated protein 1 [Source:RefSeq peptide;Acc:NP_001178893]
Organism:Rat (Rattus norvegicus)
Coordinates:3:119968973..119985554(-)


>ENSRNOG00000015984
ATGTCGGTCCCAAGCGCACTCATGAAGCAGCCGCCCATTCAGTCTACGGCTGGGGCCGTCCCAGTTCGCAATGAGAAAGG
TGAGATCTCAATGGAAAAAGTGAAGGTAAAACGTTATGTGTCCGGAAAAAGACCAGATTATGCCCCTATGGAGTCCTCAG
ATGAAGAGGATGAAGAATTTCAGTTCATTAAGAAAGCTAAGGAACAAGAAGCAGAGCCTGAGGAACAGGAGGAGGATTCA
TCCAGTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGAGGTTGGCTCGACACAGAAAAAT
AGTGGAACCTGAAGTAGTGGGAGAAAGTGACTCAGAAGTAGAAGGAGATGCTTGGCGCCTGGAACGAGAAGATAGCAGTG
AGGAAGAGGAGGAGGAAATCGATGACGAAGAAATAGAGCGGCGCCGCGGCATGATGCGGCAGCGAGCACAGGAGAGGAAA
AATGAAGAGATGGAGGTCATGGAGGTGGAAGATGAAGGACGCTCTGGGGAGGAGTCCGAGTCAGAGTCTGAGTATGAGGA
GTACACAGACAGTGAAGATGAAATGGAGCCTCGACTTAAGCCTGTCTTCATTCGAAAGAAGGATCGTGTGACAGTTCAAG
AACGAGAAGCTGAGGCATTGAGACAGAAGGAATTGGAGCAGGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACC
CTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTGGAGGAGAACAAGCGGTCCCTTGCCGCCCTGGATGCACTCAATAC
AGATGATGAAAATGACGAGGAGGAGTATGAGGCGTGGAAAGTCCGAGAGCTCAAAAGAATCAAGCGGGACAGAGAGGACC
GAGAAGCGCTTGAAAAGGAGAAAGCAGAAATTGAACGCATGAGAAACCTGACTGAGGAAGAAAGGCGGGCTGAACTTCGG
GCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAAGTTTCTACAAAAGTATTATCACCGAGGTGCCTT
CTTCATGGATGAGGATGAAGAAGTCTACAAGAGAGATTTTAGTGCACCTACTCTCGAGGACCATTTCAATAAAACCATTC
TTCCAAAAGTCATGCAGGTCAAGAATTTTGGACGGTCTGGTCGCACCAAGTACACCCACCTTGTGGATCAAGATACCACT
TCTTTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAACACAAAATTCTTTAAACAAAAGGCCGCAGGGGTACGAGATGT
ATTTGAACGGCCATCTGCCAAGAAGAGGAAAACCACCTAG

Library Parental gene expression (RPM)
SRP017611_liver 11 .63 RPM
SRP017611_kidney 22 .26 RPM
SRP017611_brain 30 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000013870 ortholog_many2many 1 retrogene
retro_dord_22,
Myotis lucifugus ENSMLUG00000013000 ortholog_one2many 2 retrogenes
retro_mluc_1384, retro_mluc_2298,
Mus musculus ENSMUSG00000048222 ortholog_many2many 2 retrogenes
retro_mmus_1147, retro_mmus_2346,
Mus musculus ENSMUSG00000068479 ortholog_many2many 2 retrogenes
retro_mmus_2386, retro_mmus_2638,
Otolemur garnettii ENSOGAG00000010206 ortholog_one2many 1 retrogene
retro_ogar_1784,
Sarcophilus harrisii ENSSHAG00000014628 ortholog_many2many 1 retrogene
retro_shar_107,
Ictidomys tridecemlineatus ENSSTOG00000006967 ortholog_one2many 2 retrogenes
retro_itri_1105, retro_itri_1494,
Tupaia belangeri ENSTBEG00000005050 ortholog_one2many 2 retrogenes
retro_tbel_3001, retro_tbel_3246,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_83 99.09 100.00
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Download FASTA sequences of all ENSRNOG00000015984 retrocopies