Parental gene: | Mfap1b, ENSMUSG00000048222 |
| Aliases: | None |
| Description: | microfibrillar-associated protein 1B [Source:MGI Symbol;Acc:MGI:3694697] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:121460234..121474067(-) |
>ENSMUSG00000048222
ATGTCGGTCCCAAGCGCACTCATGAAGCAGCCGCCCATCCAGTCTACGGCTGGGGCCGTCCCAGTTCGAAACGAGAAAGG
TGAGATCTCAATGGAAAAGGTGAAGGTGAAACGATATGTGTCCGGAAAGAGACCAGATTATGCCCCTATGGAGTCCTCAG
ATGAAGAGGATGAAGAATTTCAGTTCATTAAGAAAGCTAAGGAACAAGAAGCAGAGCCTGAGGAACAGGAGGAGGACTCA
TCCAGTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGCGATTGGCTCGACACAGAAAGAT
CGTGGAACCTGAAGTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGATGCTTGGCGCCTGGAACGAGAAGACAGCAGTG
AGGAAGAGGAGGAAGAGATTGACGATGAAGAAATTGAGCGGCGCCGTGGCATGATGCGTCAGCGAGCACAGGAGAGGAAA
AATGAAGAGATGGAAGTCATGGAGGTGGAAGATGAAGGGCGCTCTGGGGAGGAGTCTGAGTCAGAGTCTGAGTATGAGGA
GTACACAGACAGTGAGGATGAAATGGAGCCTCGACTTAAGCCTGTCTTCATTCGAAAGAAGGATCGGGTGACAGTTCAAG
AACGAGAAGCTGAAGCATTGAAACAGAAGGAACTGGAACAAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACC
CTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATAC
TGATGATGAAAATGACGAGGAAGAATACGAGGCATGGAAAGTCCGCGAGCTCAAAAGAATCAAGAGGGAGAGAGAAGACC
GAGAAGCGCTTGAAAAGGAGAAAGCAGAAATTGAACGCATGAGAAACCTGACTGAGGAAGAAAGGCGGGCAGAACTTCGG
GCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAAGTTTCTACAGAAGTATTATCACCGAGGTGCCTT
CTTCATGGATGAGGATGAAGAAGTCTACAAGAGAGACTTTAGTGCACCTACTCTTGAGGACCATTTCAACAAAACCATTC
TTCCTAAAGTCATGCAGGTCAAGAATTTTGGACGGTCTGGTCGCACCAAGTACACCCACCTTGTGGATCAAGATACCACT
TCCTTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAACACAAAATTCTTTAAACAAAAGGCAGCAGGGGTACGAGATGT
ATTTGAGCGACCATCTGCCAAGAAGAGGAAAACCACCTAG
ATGTCGGTCCCAAGCGCACTCATGAAGCAGCCGCCCATCCAGTCTACGGCTGGGGCCGTCCCAGTTCGAAACGAGAAAGG
TGAGATCTCAATGGAAAAGGTGAAGGTGAAACGATATGTGTCCGGAAAGAGACCAGATTATGCCCCTATGGAGTCCTCAG
ATGAAGAGGATGAAGAATTTCAGTTCATTAAGAAAGCTAAGGAACAAGAAGCAGAGCCTGAGGAACAGGAGGAGGACTCA
TCCAGTGACCCCCGACTTCGGCGGTTACAGAACCGCATCAGTGAAGATGTGGAAGAGCGATTGGCTCGACACAGAAAGAT
CGTGGAACCTGAAGTAGTGGGAGAGAGCGACTCAGAAGTAGAAGGGGATGCTTGGCGCCTGGAACGAGAAGACAGCAGTG
AGGAAGAGGAGGAAGAGATTGACGATGAAGAAATTGAGCGGCGCCGTGGCATGATGCGTCAGCGAGCACAGGAGAGGAAA
AATGAAGAGATGGAAGTCATGGAGGTGGAAGATGAAGGGCGCTCTGGGGAGGAGTCTGAGTCAGAGTCTGAGTATGAGGA
GTACACAGACAGTGAGGATGAAATGGAGCCTCGACTTAAGCCTGTCTTCATTCGAAAGAAGGATCGGGTGACAGTTCAAG
AACGAGAAGCTGAAGCATTGAAACAGAAGGAACTGGAACAAGAAGCAAAACGCATGGCTGAGGAGCGGCGCAAGTACACC
CTCAAGATTGTAGAAGAAGAGACCAAGAAAGAGCTAGAGGAGAACAAGCGGTCTCTTGCTGCCCTGGATGCGCTCAATAC
TGATGATGAAAATGACGAGGAAGAATACGAGGCATGGAAAGTCCGCGAGCTCAAAAGAATCAAGAGGGAGAGAGAAGACC
GAGAAGCGCTTGAAAAGGAGAAAGCAGAAATTGAACGCATGAGAAACCTGACTGAGGAAGAAAGGCGGGCAGAACTTCGG
GCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAAGGCAAATACAAGTTTCTACAGAAGTATTATCACCGAGGTGCCTT
CTTCATGGATGAGGATGAAGAAGTCTACAAGAGAGACTTTAGTGCACCTACTCTTGAGGACCATTTCAACAAAACCATTC
TTCCTAAAGTCATGCAGGTCAAGAATTTTGGACGGTCTGGTCGCACCAAGTACACCCACCTTGTGGATCAAGATACCACT
TCCTTTGACTCTGCATGGGGCCAAGAGAGTGCCCAGAACACAAAATTCTTTAAACAAAAGGCAGCAGGGGTACGAGATGT
ATTTGAGCGACCATCTGCCAAGAAGAGGAAAACCACCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 9 .39 RPM |
| SRP007412_cerebellum | 5 .60 RPM |
| SRP007412_heart | 5 .82 RPM |
| SRP007412_kidney | 4 .62 RPM |
| SRP007412_liver | 1 .69 RPM |
| SRP007412_testis | 2 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000013870 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013000 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000068479 | within_species_paralog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000010206 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000015984 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014628 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006967 | ortholog_one2many | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000005050 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1147 | 79.53 | 67.43 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2346 | 93.21 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000048222 retrocopies