Parental gene:

Emg1, ENSRNOG00000012828

Aliases:Emg1, Grcc2f
Description:probable ribosome biogenesis protein NEP1 [Source:RefSeq peptide;Acc:NP_001101358]
Organism:Rat (Rattus norvegicus)
Coordinates:4:224239980..224248243(-)


>ENSRNOG00000012828
ATGGCTGCGACCAGTGGTGGCTTCCAACCTCGTGAGCGGCGTTTTTCAGTGCAGGAACAGGACTGGGACCCTGCGCCGCC
TAAGAGACCCCGGCTTGGGGCAGGAAGCAAGTGTGGAGGCCGTAGGCTCATTGTGGTGTTGGAAGGGGCCAGTCTGGAGA
CAGTCAAGGTAGGGAAAACTTACGAGCTACTCAACTGTGACAAGCACAAGTCCATGTTGTTGAAGAATGGACGGGACCCA
GGGGAAGTCAGACCAGACATCACCCACCAGAGCTTGCTGATGCTTATGGACAGCCCCCTGAACCGAGCTGGCTTGCTCCA
GGTTTATATCCACACACAGAAGAATGTGCTCATTGAAGTGAACCCCCAGACTCGGATTCCTAGGACCTTTGACCGATTTT
GTGGCCTCATGGTTCAGCTTTTACACAAACTGAGCGTCCGAGCAGCTGACGGCCCTCAGAAGCTTTTGAAGGTAATTAAG
AATCCAGTGTCTGACCACTTCCCAGTTGGCTGTATGAAAATTGGCACTTCCTTTTCTGTTGAGGACATCAGTGACATTCG
AGAGTTGGTGCCCAGTAGTGACCCAGTTGTTTTCGTAGTGGGGGCCTTTGCCCATGGCAAGGTCAGTGTGGAGTACACAG
AAAAGATGGTGTCCATCAGCAACTACCCACTCTCTGCCGCGCTGACCTGTGCTAAAGTTACCACAGCTTTTGAAGAAGTA
TGGGGCGTCATTTGA

Library Parental gene expression (RPM)
SRP017611_liver 8 .20 RPM
SRP017611_kidney 15 .70 RPM
SRP017611_brain 16 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013753 ortholog_one2one 1 retrogene
retro_amel_1924,
Callithrix jacchus ENSCJAG00000007120 ortholog_one2one 1 retrogene
retro_cjac_2960,
Gorilla gorilla ENSGGOG00000004287 ortholog_one2one 1 retrogene
retro_ggor_3077,
Macropus eugenii ENSMEUG00000000831 ortholog_one2one 1 retrogene
retro_meug_1299,
Myotis lucifugus ENSMLUG00000009196 ortholog_one2one 1 retrogene
retro_mluc_737,
Macaca mulatta ENSMMUG00000010207 ortholog_one2one 1 retrogene
retro_mmul_671,
Nomascus leucogenys ENSNLEG00000005080 ortholog_one2one 1 retrogene
retro_nleu_501,
Otolemur garnettii ENSOGAG00000006975 ortholog_one2one 2 retrogenes
retro_ogar_2971, retro_ogar_945,
Pongo abelii ENSPPYG00000004215 ortholog_one2one 1 retrogene
retro_pabe_2924,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1459 54.01 54.92
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Download FASTA sequences of all ENSRNOG00000012828 retrocopies