Parental gene: | Atad1, ENSRNOG00000010861 |
| Aliases: | Atad1, Ab2-088 |
| Description: | ATPase family AAA domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q505J9] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:258466602..258609714(-) |
>ENSRNOG00000010861
ATGGTACATGCTGAAGCCTTTTCTCGTCCATTGAGTCGGAACGAAGTTGTCGGTTTAATTTTTCGTTTAACAATCTTTGG
TGCAGTAACATACTTCACTATTAAATGGATGGTAGATGCCATTGACCCCACCAGGAAGCAGAAAGTGGAAGCTCAGAAAC
AGGCGGAAAAACTGATGAAGCAAATTGGTGTGAAAAATGTGAAGCTTTCAGAGTATGAGATGAGTATTGCTGCTCATCTG
GTAGACCCTCTTAATATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTTATTACAGATCTGAAAGACACAGT
CATCCTACCTATCAAAAAGAAGCATTTGTTTGAGAATTCCAGACTTCTGCAGCCTCCCAAAGGTGTTCTCCTGTATGGAC
CTCCGGGCTGTGGGAAAACATTAATTGCCAAAGCGACAGCCAAAGAAGCGGGCTGTCGATTTATTAACCTTCAGCCTTCC
ACACTGACAGATAAGTGGTATGGAGAATCTCAGAAACTGGCTGCTGCTGTCTTCTCCCTGGCCATAAAGCTACAGCCGTC
TATCATATTTATCGATGAAATAGACTCATTTCTACGAAATCGTTCCAGTTCCGACCACGAAGCTACAGCAATGATGAAAG
CCCAGTTTATGAGTCTTTGGGATGGACTGGACACTGATCACAGCTGCCAGGTCATAGTGATGGGAGCTACCAATCGTCCT
CAAGACCTTGACTCTGCTATAATGAGAAGAATGCCCACAAGATTTCATATTAACCAGCCTGCTCTAAAACAAAGAGAAGC
AATTTTAAAACTCATCTTGAAAAATGAAAATGTGGATAGACATGTAGATCTTCTAGAAGTTGCCCAGGAAACTGATGGGT
TTTCAGGAAGTGACCTAAAAGAAATGTGTCGAGATGCTGCCCTCCTCTGCGTCAGGGAATATGTCAATTCTACATCAGAA
GAAAGTCATGACGAAGATGAAATCCGGCCTGTGCAGCAGCAGGACTTGCATCGGGCAATTGAGAAGATGAAGAAATCAAA
GGATGCAGCGTTTCAGAGCGTTCTGACTCACGTTTGTTTAGATTAG
ATGGTACATGCTGAAGCCTTTTCTCGTCCATTGAGTCGGAACGAAGTTGTCGGTTTAATTTTTCGTTTAACAATCTTTGG
TGCAGTAACATACTTCACTATTAAATGGATGGTAGATGCCATTGACCCCACCAGGAAGCAGAAAGTGGAAGCTCAGAAAC
AGGCGGAAAAACTGATGAAGCAAATTGGTGTGAAAAATGTGAAGCTTTCAGAGTATGAGATGAGTATTGCTGCTCATCTG
GTAGACCCTCTTAATATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTTATTACAGATCTGAAAGACACAGT
CATCCTACCTATCAAAAAGAAGCATTTGTTTGAGAATTCCAGACTTCTGCAGCCTCCCAAAGGTGTTCTCCTGTATGGAC
CTCCGGGCTGTGGGAAAACATTAATTGCCAAAGCGACAGCCAAAGAAGCGGGCTGTCGATTTATTAACCTTCAGCCTTCC
ACACTGACAGATAAGTGGTATGGAGAATCTCAGAAACTGGCTGCTGCTGTCTTCTCCCTGGCCATAAAGCTACAGCCGTC
TATCATATTTATCGATGAAATAGACTCATTTCTACGAAATCGTTCCAGTTCCGACCACGAAGCTACAGCAATGATGAAAG
CCCAGTTTATGAGTCTTTGGGATGGACTGGACACTGATCACAGCTGCCAGGTCATAGTGATGGGAGCTACCAATCGTCCT
CAAGACCTTGACTCTGCTATAATGAGAAGAATGCCCACAAGATTTCATATTAACCAGCCTGCTCTAAAACAAAGAGAAGC
AATTTTAAAACTCATCTTGAAAAATGAAAATGTGGATAGACATGTAGATCTTCTAGAAGTTGCCCAGGAAACTGATGGGT
TTTCAGGAAGTGACCTAAAAGAAATGTGTCGAGATGCTGCCCTCCTCTGCGTCAGGGAATATGTCAATTCTACATCAGAA
GAAAGTCATGACGAAGATGAAATCCGGCCTGTGCAGCAGCAGGACTTGCATCGGGCAATTGAGAAGATGAAGAAATCAAA
GGATGCAGCGTTTCAGAGCGTTCTGACTCACGTTTGTTTAGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 31 .67 RPM |
| SRP017611_kidney | 74 .32 RPM |
| SRP017611_brain | 79 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005296 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000138138 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026651 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006414 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012135 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012082 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002717 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000014020 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006563 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2752 | 100.00 | 65.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000010861 retrocopies