Parental gene:

ATAD1, ENSG00000138138

Aliases:ATAD1, AFDC1, THORASE
Description:ATPase family, AAA domain containing 1 [Source:HGNC Symbol;Acc:25903]
Organism:Human (Homo sapiens)
Coordinates:10:89511268..89601100(-)


>ENSG00000138138
ATGGTACATGCTGAAGCCTTTTCTCGTCCTTTGAGTCGGAATGAAGTTGTTGGTTTAATTTTCCGTTTGACAATATTTGG
TGCAGTGACATACTTTACTATCAAATGGATGGTAGATGCAATTGATCCAACCAGAAAGCAAAAAGTAGAAGCTCAGAAAC
AGGCAGAAAAACTAATGAAGCAAATTGGAGTGAAAAATGTGAAGCTCTCAGAATATGAAATGAGTATTGCTGCTCATCTT
GTAGACCCTCTTAATATGCATGTTACTTGGAGTGATATAGCAGGTTTAGATGATGTCATTACGGATCTGAAAGACACAGT
CATCTTACCTATCAAAAAGAAACATTTGTTTGAGAATTCCAGGCTTCTGCAGCCTCCAAAAGGTGTTCTTCTCTATGGGC
CTCCAGGCTGTGGTAAAACGTTGATTGCCAAGGCCACAGCCAAAGAAGCAGGCTGTCGATTTATTAACCTTCAGCCTTCG
ACACTGACCGATAAGTGGTATGGAGAATCTCAGAAATTGGCTGCTGCTGTCTTCTCCCTTGCCATAAAGCTACAACCATC
CATCATCTTTATAGATGAAATAGACTCCTTTCTACGAAACCGTTCAAGTTCTGACCATGAAGCTACAGCCATGATGAAAG
CTCAGTTTATGAGTCTCTGGGATGGATTGGATACTGATCACAGCTGCCAGGTCATAGTAATGGGAGCTACCAATCGTCCT
CAGGACCTTGACTCGGCTATAATGAGAAGAATGCCTACAAGATTTCATATCAACCAGCCTGCTTTAAAACAGAGAGAAGC
AATCCTGAAACTCATCTTGAAAAATGAAAATGTGGATAGGCATGTAGACCTGCTAGAAGTTGCCCAGGAAACTGATGGGT
TTTCAGGAAGTGACCTAAAAGAGATGTGTCGAGATGCTGCCCTCCTCTGTGTTAGAGAATATGTTAATTCTACATCAGAA
GAAAGCCATGACGAAGATGAAATTCGGCCTGTTCAACAGCAGGACCTGCATCGGGCAATTGAAAAGATGAAGAAATCAAA
GGATGCAGCATTTCAGAATGTTTTAACACATGTTTGTTTAGATTAA

Library Parental gene expression (RPM)
bodymap2_liver 29 .57 RPM
bodymap2_lung 71 .13 RPM
bodymap2_breast 78 .23 RPM
bodymap2_adipose 50 .33 RPM
bodymap2_adrenal 44 .19 RPM
bodymap2_skeletal_muscle 69 .93 RPM
bodymap2_thyroid 68 .73 RPM
bodymap2_prostate 82 .32 RPM
bodymap2_colon 82 .25 RPM
bodymap2_testis 121 .58 RPM
bodymap2_brain 97 .79 RPM
bodymap2_heart 112 .48 RPM
bodymap2_white_blood_cells 59 .34 RPM
bodymap2_lymph_node 52 .83 RPM
bodymap2_ovary 72 .08 RPM
bodymap2_kidney 84 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005296 ortholog_one2one 1 retrogene
retro_cjac_1101,
Gorilla gorilla ENSGGOG00000026651 ortholog_one2one 1 retrogene
retro_ggor_1393,
Macaca mulatta ENSMMUG00000006414 ortholog_one2many 1 retrogene
retro_mmul_608,
Nomascus leucogenys ENSNLEG00000012135 ortholog_one2one 1 retrogene
retro_nleu_1231,
Oryctolagus cuniculus ENSOCUG00000012082 ortholog_one2one 1 retrogene
retro_ocun_1634,
Pan troglodytes ENSPTRG00000002717 ortholog_one2one 1 retrogene
retro_ptro_1255,
Pteropus vampyrus ENSPVAG00000014020 ortholog_one2one 1 retrogene
retro_pvam_1080,
Rattus norvegicus ENSRNOG00000010861 ortholog_one2one 1 retrogene
retro_rnor_2752,
Ictidomys tridecemlineatus ENSSTOG00000006563 ortholog_one2one 1 retrogene
retro_itri_309,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1900 75.95 71.75
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Download FASTA sequences of all ENSG00000138138 retrocopies