Parental gene: | Eif5, ENSRNOG00000010218 |
| Aliases: | None |
| Description: | Eukaryotic translation initiation factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q07205] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 6:144405138..144412325(-) |
>ENSRNOG00000010218
ATGTCTGTCAACGTCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATGCCCCGTTTGATTGCTAAGGTTGAGGG
CAAAGGAAATGGAATCAAGACAGTTATAGTCAACATGGTTGACGTTGCAAAGGCGCTTAATCGGCCTCCAACGTATCCCA
CCAAATATTTTGGTTGTGAGCTGGGAGCACAGACCCAGTTTGATGTTAAGAATGACCGTTACATTGTCAATGGATCTCAT
GAGGCGAATAAGCTGCAAGACATGTTGGATGGATTCATTAAAAAATTTGTTCTCTGTCCTGAGTGTGAGAATCCTGAAAC
AGATCTGCATGTCAATCCAAAGAAGCAAACAATAGGTAATTCTTGTAAAGCCTGTGGGTACCGAGGCATGCTTGACACAC
ATCATAAACTCTGTACATTCATTCTCAAAAACCCACCTGAGAATAGTGACATTGGTACAGGAAAGAAAGAGAAAGAAAAG
AAAAATAGAAAGGGCAAGGACAAGGAAAATGGCTCTGTATCCACCAGTGAGACACCACCACCTCCACCACCAAATGAAAT
TAGTCCTCCACATGCTGTGGAAGAAGAGGAAGATGATGATTGGGGGGAGGATACAACTGAGGAAGCTCAAAGGCGCAGAA
TGGATGAAATCAGTGACCATGCAAAAGGTCTGACACTTAGCGATGATTTGGAAAGAACTGTAGAAGAGCGTGTTAACATC
CTGTTTGATTTTGTTAAGAAAAAGAAAGAAGAGGGCATTATTGATTCATCTGATAAAGACATTGTGGCTGAGGCAGAAAG
ACTGGATGTAAAAGCCATGGGCCCTCTCGTTTTGACAGAAGTTCTCTTTGATGAGAAGATAAGAGAGCAAATCAAGAAAT
ACAGGCGCCATTTTTTAAGATTTTGTCATAACAACAAAAAGGCCCAGCGGTACCTTCTTCATGGTTTGGAATGTGTGGTA
GCAATGCATCAAGCTCAGTTGATCTCCAAGATTCCACATATCTTGAAGGAGATGTATGATGCAGACCTTTTAGAGGAAGA
GGTCATTATCAGCTGGTCAGAAAAGGCCTCTAAGAAATATGTCTCAAAAGAACTTGCCAAAGAGATTCGTGTCAAAGCAG
AGCCATTTATTAAATGGTTGAAGGAAGCGGAGGAGGAATCTTCTGGTGGTGAGGAAGAAGACGAAGATGAAAATATTGAG
GTGGTATATTCGAAGACTGCCAGTGTACCAAAAGTTGAAACTGTGAAGTCTGACAACAAGGATGACGACATTGATATTGA
TGCCATTTAA
ATGTCTGTCAACGTCAACCGCAGCGTGTCAGACCAGTTCTATCGCTACAAGATGCCCCGTTTGATTGCTAAGGTTGAGGG
CAAAGGAAATGGAATCAAGACAGTTATAGTCAACATGGTTGACGTTGCAAAGGCGCTTAATCGGCCTCCAACGTATCCCA
CCAAATATTTTGGTTGTGAGCTGGGAGCACAGACCCAGTTTGATGTTAAGAATGACCGTTACATTGTCAATGGATCTCAT
GAGGCGAATAAGCTGCAAGACATGTTGGATGGATTCATTAAAAAATTTGTTCTCTGTCCTGAGTGTGAGAATCCTGAAAC
AGATCTGCATGTCAATCCAAAGAAGCAAACAATAGGTAATTCTTGTAAAGCCTGTGGGTACCGAGGCATGCTTGACACAC
ATCATAAACTCTGTACATTCATTCTCAAAAACCCACCTGAGAATAGTGACATTGGTACAGGAAAGAAAGAGAAAGAAAAG
AAAAATAGAAAGGGCAAGGACAAGGAAAATGGCTCTGTATCCACCAGTGAGACACCACCACCTCCACCACCAAATGAAAT
TAGTCCTCCACATGCTGTGGAAGAAGAGGAAGATGATGATTGGGGGGAGGATACAACTGAGGAAGCTCAAAGGCGCAGAA
TGGATGAAATCAGTGACCATGCAAAAGGTCTGACACTTAGCGATGATTTGGAAAGAACTGTAGAAGAGCGTGTTAACATC
CTGTTTGATTTTGTTAAGAAAAAGAAAGAAGAGGGCATTATTGATTCATCTGATAAAGACATTGTGGCTGAGGCAGAAAG
ACTGGATGTAAAAGCCATGGGCCCTCTCGTTTTGACAGAAGTTCTCTTTGATGAGAAGATAAGAGAGCAAATCAAGAAAT
ACAGGCGCCATTTTTTAAGATTTTGTCATAACAACAAAAAGGCCCAGCGGTACCTTCTTCATGGTTTGGAATGTGTGGTA
GCAATGCATCAAGCTCAGTTGATCTCCAAGATTCCACATATCTTGAAGGAGATGTATGATGCAGACCTTTTAGAGGAAGA
GGTCATTATCAGCTGGTCAGAAAAGGCCTCTAAGAAATATGTCTCAAAAGAACTTGCCAAAGAGATTCGTGTCAAAGCAG
AGCCATTTATTAAATGGTTGAAGGAAGCGGAGGAGGAATCTTCTGGTGGTGAGGAAGAAGACGAAGATGAAAATATTGAG
GTGGTATATTCGAAGACTGCCAGTGTACCAAAAGTTGAAACTGTGAAGTCTGACAACAAGGATGACGACATTGATATTGA
TGCCATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 111 .55 RPM |
| SRP017611_kidney | 175 .99 RPM |
| SRP017611_brain | 147 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000001236 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000015883 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015220 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000100664 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013424 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016105 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006169 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006753 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002384 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1781 | 85.18 | 92.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2459 | 87.91 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000010218 retrocopies