Parental gene: | ENSPVAG00000016640 |
| Aliases: | None |
| Description: | None |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_3563:183478..198152(-) |
>ENSPVAG00000016640
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGATGTGACCGAGGCGATGCT
CTACGAGAAGTTCAGCCCGGCCGGGCCCATCCTGTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCT
ACGCGTATGTGAACTTCCAGCAGCCAGCGGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAG
CCAGTACGCATCATGTGGTCTCAGCGTGATCCATCACTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGA
CAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATG
AAAATGGTTCCAAGGGTTATGGATTTGTACATTTTGAGACACAGGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGG
ATGCTTCTAAATGATCGCAAAGTATTTGTTGGACGGTTTAAGTCTCGTAAAGAACGAGAAGCAGAACTTGGAGCTAGGGC
AAAAGAATTCACCAACGTTTACATCAAGAATTTTGGAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGT
TTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAAAGTGGAAAATCCAAAGGTTTTGGATTTGTAAGCTTCGAAAGA
CATGAAGATGCACAGAAAGCCGTGGATGAGATGAATGGAAAGGAGCTCAATGGAAAACAAATTTACGTTGGTCGAGCTCA
GAAAAAAGTGGAACGGCAGACAGAACTTAAGCGCAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGTG
TTAACCTTTATGTGAAAAATCTTGATGATGGTATTGATGATGAACGTCTCCGGAAAGAGTTTTCTCCATTTGGTACAATC
ACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGTTTTGTATGTTTCTCCTCCCCAGAAGAAGCCAC
TAAAGCAGTTACAGAAATGAATGGTAGAATCGTGGCCACCAAGCCATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGC
GCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGCGTGAGAGCTGTGCCCAACCCCGTAATCAACCCCTAC
CAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCA
AATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCATTCCAAAATATGCCCGGTGCTA
TCCGCCCAGCCGCTCCTAGACCACCATTTAGTACTATGAGACCAGCTTCTTCACAGGTTCCACGAGTCATGTCAACGCAG
CGTGTTGCTAACACATCAACACAGACAATGGGTCCACGTCCTGCAGCTGCTGCCGCTGCAGCTACTCCTGCTGTCCGCAC
CGTTCCACAGTATAAATATGCTGCGGGAGTTCGCAATCCTCAACAACATCTTAATGCTCAGCCACAAGTTACCATGCAGC
AGCCTGCTGTTCATGTACAAGGTCAGGAGCCCTTGACTGCTTCCATGTTGGCATCTGCCCCTCCTCAAGAGCAAAAGCAA
ATGTTGGGTGAACGGCTGTTTCCTCTAATTCAAGCCATGCACCATAATCTTGCTGGTAAAATCACTGGCATGTTGTTGGA
AATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCTCCGTTCTAAAGTTGATGAAGCTGTAGCTGTGC
TACAAGCCCACCAAGCTAAGGAGGCTGCCCAGAAAGCAGTTAACAGTGCCACTGGTGTTCCAACTGTTTAA
ATGAACCCCAGCGCCCCCAGCTACCCCATGGCCTCGCTCTACGTGGGGGACCTACACCCCGATGTGACCGAGGCGATGCT
CTACGAGAAGTTCAGCCCGGCCGGGCCCATCCTGTCCATCCGGGTCTGCAGGGACATGATCACCCGCCGCTCCTTGGGCT
ACGCGTATGTGAACTTCCAGCAGCCAGCGGACGCGGAGCGTGCTTTGGACACCATGAATTTTGATGTTATAAAGGGCAAG
CCAGTACGCATCATGTGGTCTCAGCGTGATCCATCACTTCGCAAAAGTGGAGTGGGCAACATATTCATTAAAAATTTGGA
CAAATCCATTGATAATAAAGCACTGTATGATACATTTTCTGCTTTTGGTAACATCCTTTCATGTAAGGTGGTTTGTGATG
AAAATGGTTCCAAGGGTTATGGATTTGTACATTTTGAGACACAGGAAGCAGCTGAAAGAGCTATTGAAAAAATGAATGGG
ATGCTTCTAAATGATCGCAAAGTATTTGTTGGACGGTTTAAGTCTCGTAAAGAACGAGAAGCAGAACTTGGAGCTAGGGC
AAAAGAATTCACCAACGTTTACATCAAGAATTTTGGAGAAGACATGGATGATGAGCGCCTTAAGGATCTCTTTGGCAAGT
TTGGACCTGCCTTAAGTGTGAAAGTAATGACTGATGAAAGTGGAAAATCCAAAGGTTTTGGATTTGTAAGCTTCGAAAGA
CATGAAGATGCACAGAAAGCCGTGGATGAGATGAATGGAAAGGAGCTCAATGGAAAACAAATTTACGTTGGTCGAGCTCA
GAAAAAAGTGGAACGGCAGACAGAACTTAAGCGCAAATTTGAACAGATGAAGCAAGATAGGATCACCAGATACCAGGGTG
TTAACCTTTATGTGAAAAATCTTGATGATGGTATTGATGATGAACGTCTCCGGAAAGAGTTTTCTCCATTTGGTACAATC
ACTAGTGCAAAGGTTATGATGGAGGGTGGTCGCAGCAAAGGGTTTGGTTTTGTATGTTTCTCCTCCCCAGAAGAAGCCAC
TAAAGCAGTTACAGAAATGAATGGTAGAATCGTGGCCACCAAGCCATTGTATGTAGCTTTAGCTCAGCGCAAAGAAGAGC
GCCAGGCTCACCTCACTAACCAGTATATGCAGAGAATGGCAAGCGTGAGAGCTGTGCCCAACCCCGTAATCAACCCCTAC
CAGCCAGCACCTCCTTCAGGTTACTTCATGGCAGCTATCCCACAGACTCAGAACCGTGCTGCATACTATCCTCCTAGCCA
AATTGCTCAACTAAGACCAAGTCCTCGCTGGACTGCTCAGGGTGCCAGACCTCATCCATTCCAAAATATGCCCGGTGCTA
TCCGCCCAGCCGCTCCTAGACCACCATTTAGTACTATGAGACCAGCTTCTTCACAGGTTCCACGAGTCATGTCAACGCAG
CGTGTTGCTAACACATCAACACAGACAATGGGTCCACGTCCTGCAGCTGCTGCCGCTGCAGCTACTCCTGCTGTCCGCAC
CGTTCCACAGTATAAATATGCTGCGGGAGTTCGCAATCCTCAACAACATCTTAATGCTCAGCCACAAGTTACCATGCAGC
AGCCTGCTGTTCATGTACAAGGTCAGGAGCCCTTGACTGCTTCCATGTTGGCATCTGCCCCTCCTCAAGAGCAAAAGCAA
ATGTTGGGTGAACGGCTGTTTCCTCTAATTCAAGCCATGCACCATAATCTTGCTGGTAAAATCACTGGCATGTTGTTGGA
AATTGATAATTCAGAACTTCTTCATATGCTTGAGTCTCCAGAGTCTCTCCGTTCTAAAGTTGATGAAGCTGTAGCTGTGC
TACAAGCCCACCAAGCTAAGGAGGCTGCCCAGAAAGCAGTTAACAGTGCCACTGGTGTTCCAACTGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015833 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000070756 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017786 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000006222 | ortholog_one2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000022283 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003142 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004354 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018790 | possible_ortholog | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000007616 | other_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008639 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011267 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000006063 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004689 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000003865 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_10 | 65.21 | 57.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pvam_855 | 68.65 | 58.18 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000016640 retrocopies