Parental gene: | ENSPTRG00000034506 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 11:57717108..57723959(+) |
>ENSPTRG00000034506
ATGAAGACCATTCTGGGGTTCAAAGGGCTCTTTTATCTGCATTCCTTGATATGGACCTGTGCTGGGGACTGGTCAGCTAT
TCAAGTACACTGCACCCAGTTTTGGTTCTTTGCCAGGATTAAACCGACGATATTTTACAATTTGTATGTGAACCCCGATG
AAGTGTTTCTAGGAGATGGCTGCCATGTAACCCATGTTTTGCCAAATGTCTACTATGAGTTTTTCTACCATCCTCATGAC
TGTGGTATTGTAACTCAACCTCTCCAGCAAGTTCTTCTGCTTAAAACTAAAATCAAGTATATCTCAAGAGACTCTACAGT
CCGATCTGAAATGCCTCTGTCGTGTGTTGTCCACAAAAAATCCCAA
ATGAAGACCATTCTGGGGTTCAAAGGGCTCTTTTATCTGCATTCCTTGATATGGACCTGTGCTGGGGACTGGTCAGCTAT
TCAAGTACACTGCACCCAGTTTTGGTTCTTTGCCAGGATTAAACCGACGATATTTTACAATTTGTATGTGAACCCCGATG
AAGTGTTTCTAGGAGATGGCTGCCATGTAACCCATGTTTTGCCAAATGTCTACTATGAGTTTTTCTACCATCCTCATGAC
TGTGGTATTGTAACTCAACCTCTCCAGCAAGTTCTTCTGCTTAAAACTAAAATCAAGTATATCTCAAGAGACTCTACAGT
CCGATCTGAAATGCCTCTGTCGTGTGTTGTCCACAAAAAATCCCAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .09 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .03 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000027348 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000214788 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016792 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013194 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000003223 | ortholog_one2one | 20 retrogenes |
retro_pabe_1419, retro_pabe_1525, retro_pabe_1707, retro_pabe_1713, retro_pabe_1716, retro_pabe_1720, retro_pabe_1745, retro_pabe_1749, retro_pabe_1761, retro_pabe_2101, retro_pabe_3226, retro_pabe_3227, retro_pabe_3229, retro_pabe_331, retro_pabe_3530, retro_pabe_3539, retro_pabe_3546, retro_pabe_3561, retro_pabe_3580, retro_pabe_3585,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_292 | 67.54 | 92.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1635 | 59.48 | 92.62 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2588 | 69.23 | 85.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2591 | 69.23 | 85.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2593 | 69.23 | 85.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_3066 | 70.94 | 95.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ptro_3081 | 65.71 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_ptro_3082 | 70.48 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_ptro_3084 | 69.81 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_ptro_3085 | 68.27 | 85.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_ptro_3087 | 69.23 | 85.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_ptro_3088 | 68.27 | 85.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_ptro_3284 | 69.52 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_ptro_3289 | 69.52 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_ptro_3293 | 70.48 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_ptro_3300 | 69.52 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_ptro_3305 | 69.52 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_ptro_3309 | 70.48 | 86.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000034506 retrocopies