Parental gene: | ENSPPYG00000003223 |
| Aliases: | None |
| Description: | None |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:16558161..16594273(-) |
>ENSPPYG00000003223
ATGAAGACCGTTCTGGGGTTCAAAGGGCTCTTTTATCTGCATTCCTTGATATGGACCTGTGCTGGGGACTGGTCAGCTAT
TCAAGTACACTGCACCCAGTTTTGGTTCTTTGCCAGGATTAAACCCACGATATTTTACAATTTGTATGTGAACCCCGATG
AAGTGTTTCTAGGAGATGGCTGCTGTGTAACCCATGTTTTGCCAAATGTCTACTATGAGTTTTTCTACCATCCTCATGAC
TGTGGTATTGTAACTCAACCTCTCCAGGAAGTTCTTCTGCTTAAAACTAAAATCAAGCATATCTCAAGAGACTCTACTGT
CCGATCTGAAATGCCTCTGTCATGTGTTGTCCAC
ATGAAGACCGTTCTGGGGTTCAAAGGGCTCTTTTATCTGCATTCCTTGATATGGACCTGTGCTGGGGACTGGTCAGCTAT
TCAAGTACACTGCACCCAGTTTTGGTTCTTTGCCAGGATTAAACCCACGATATTTTACAATTTGTATGTGAACCCCGATG
AAGTGTTTCTAGGAGATGGCTGCTGTGTAACCCATGTTTTGCCAAATGTCTACTATGAGTTTTTCTACCATCCTCATGAC
TGTGGTATTGTAACTCAACCTCTCCAGGAAGTTCTTCTGCTTAAAACTAAAATCAAGCATATCTCAAGAGACTCTACTGT
CCGATCTGAAATGCCTCTGTCATGTGTTGTCCAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .17 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000027348 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000214788 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016792 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013194 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000034506 | ortholog_one2one | 18 retrogenes |
retro_ptro_1635, retro_ptro_2588, retro_ptro_2591, retro_ptro_2593, retro_ptro_292, retro_ptro_3066, retro_ptro_3081, retro_ptro_3082, retro_ptro_3084, retro_ptro_3085, retro_ptro_3087, retro_ptro_3088, retro_ptro_3284, retro_ptro_3289, retro_ptro_3293, retro_ptro_3300, retro_ptro_3305, retro_ptro_3309,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_331 | 63.56 | 99.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1419 | 67.92 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1525 | 60.87 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1707 | 67.29 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1713 | 69.52 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_1716 | 61.54 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_1720 | 62.61 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_1745 | 68.57 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_1749 | 60.87 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pabe_1761 | 68.57 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_pabe_2101 | 61.67 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_pabe_3226 | 68.57 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_pabe_3227 | 68.22 | 90.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_pabe_3229 | 61.74 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_pabe_3530 | 69.23 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_pabe_3539 | 66.96 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_pabe_3546 | 66.67 | 88.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_pabe_3561 | 62.18 | 99.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_pabe_3580 | 61.74 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_pabe_3585 | 61.74 | 97.46 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000003223 retrocopies