Parental gene:

RNPC3, ENSPTRG00000033902

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:104538172..104567486(+)


>ENSPTRG00000033902
ATGGCAGCTCCCGAGCAGCCGCTTGCGATATCAAGGGGATGCACGAGCTCCTCCTCGCTTTCCCCGCCTCGGGGCGACCG
AACCCTTCTGGTCAGGCACCTGCCGGCTGAGCTTACTGCTGAGGAGAAAGAGGACTTGCTGAAGTACTTCGGGGCTCAGT
CTGTGCGGGTCCTGTCAGATAAGGGGCGACTGAAACATACAGCTTTTGCCACATTCCCTAATGAAAAAGCAGCTATAAAG
GCATTGACAAGACTCCATCAACTGAAACTTTTAGGTCATACTTTAGTCGTTGAATTTGCAAAAGAGCAAGATCGAGTTCA
CTCCCCATGTCCCACTTCAGGCTCTGAAAAAAAAAAAAGGTCTGATGACCCTGTGGAAGATGATAAAGAAAAGAAAGAAC
TTGGTTATTTAACAGTAGAAAATGGAATTGCACCAAACCATGGGCTGACTTTTCCTTTAAATTCATGCCTCAAGTATATG
TACCCACCACCTTCCAGCACAATCCTAGCAAACATTGTAAATGCCTTGGCAAGTGTGCCTAAGTTCTATGTACAGGTCCT
TCATCTTATGAATAAAATGAATTTGCCCACACCTTTTGGACCAATTACTGTGCGACCTCCCATGTATGAAGACTATATGC
CATTGCATGCACCTCTTCCACCCACATCTCCTCAGCCACCTGAGGAACCTCCTTTGCCAGACGAGGATGAGGAATTATCT
AGTGAAGAATCAGAATATGAAAGCACTGATGATGAGGACCGACAGAGAATGAACAAATTAATGGAACTAGCAAATCTTCA
GCCCAAAAGACCTAAAACAATAAAGCAGCGCCATGTGAGAAAAAAGAGAAAAATAAAGGATATGTTGAATACACCTTTGT
GTCCTTCACACAGCAGTTTACATCCAGTGCTGTTACCTTCAGATGTATTTGACCAACCACAACCTGTAGGTAATAAAAGA
ATTGAATTCCATATATCTACCGACATGCCAGCTGCATTTAAGAAAGATTTAGAAAAGGAACAAAATTGTGAGGAAAAAAA
TCATGATTTACCTGCTACTGAAGTTGATGCATCCAATATAGGATTTGGAAAAATCTTCCCCAAACCTAATTTGGACATCA
CAGAGGAGATTAAAGAAGACTCTGATGAAATGCCTTCAGAATGTATTTCTAGAAGGGAATTGGAAAAGGGCAGAATTTCT
AGAGAAGAAATGGAAACACTTTCAGTTTTCAGAAGTTATGAACCGGGTGAACCAAACTGTAGAATTTATGTAAAGAATTT
AGCTAAACATGTTCAAGAAAAGGACCTTAAATATATTTTTGGAAGATATGTTGACTTTTCATCAGAAACACAGCGGATCA
TGTTTGATATACGTTTGATGAAAGAAGGTCGTATGAAAGGACAAGCTTTCATTGGACTTCCTAATGAAAAAGCAGCAGCA
AAAGCCTTAAAGGAAGCTAATGGATATGTGCTTTTTGGAAAACCCATGGTGGTTCAGTTTGCTCGATCTGCTAGACCAAA
ACAAGATCCTAAGGAAGGAAAAAGAAAGTGTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .70 RPM
SRP007412_cerebellum 45 .71 RPM
SRP007412_heart 16 .23 RPM
SRP007412_kidney 25 .84 RPM
SRP007412_liver 9 .82 RPM
SRP007412_testis 16 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000035686 ortholog_one2one 1 retrogene
retro_cjac_1397,
Homo sapiens ENSG00000185946 ortholog_one2one 1 retrogene
retro_hsap_2800,
Macaca mulatta ENSMMUG00000018039 ortholog_one2one 1 retrogene
retro_mmul_1435,
Nomascus leucogenys ENSNLEG00000012013 possible_ortholog 1 retrogene
retro_nleu_1539,
Nomascus leucogenys ENSNLEG00000015566 ortholog_one2one 1 retrogene
retro_nleu_1538,
Pongo abelii ENSPPYG00000001102 ortholog_one2one 1 retrogene
retro_pabe_2224,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1897 85.44 100.00
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Download FASTA sequences of all ENSPTRG00000033902 retrocopies