Parental gene:

RNPC3, ENSMMUG00000018039

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:106498581..106527317(+)


>ENSMMUG00000018039
CACCGTGCCCTTCCCAGAGTCTCCGAAGGGTTGCGGCTTTTCCGTGGCGCAGTTCTCGCGAGAAGGAAAATGGCAGCTCC
CGAGCAGCCGCTTGCGATATCAAGGGGATGCACGAGCTCCTCCTCGCTTTCCCCGCCTCGGGGCGACCGAACCCTTCTGG
TCAGGCACCTGCCGGCTGAGCTTACCGCTGAGGAGAAAGAGGACTTGCTGAAGTACTTCGGGGCGCAGTCCGTGCGCGTC
CTGTCAGATAAGGGGCGACTGAAACATACAGCTTTTGCCACATTCCCTAATGAAAAAGCAGCTATAAAGGCATTGACAAG
ACTCCATCAGCTGAAACTTTTAGGTCATACTTTAGTCGTTGAATTTGCAAAAGAACAAGATCAAGTTCACTCCCCATGTC
CCACTTCAGGCTCTGAAAAAAAAAAAAGGTGTAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC
ATAAACATCTTAAATGTTTTTTTTTATAGGCTGACTTTTCCTTTAAATTCATGCCTCAAGTATATGTACCCACCACCTTC
CAGCACAATCCTTGCAAACATAGTAAATGCCTTGGCAAGTGTGCCTAAGTTCTATGTACAGGTCCTTCATCTTATGAATA
AAATGAATTTGCCCACACCTTTTGGACCAATTACTGCGCGACCTCCCATGTATGAAGACTATATGCCGTTGCATGCACCT
CTTCCACCCACGTCTCCTCAGCCACCTGAGGAACCTCCTTTGCCAGACGAAGATGAGGAATTATCTAGTGAAGAATCAGA
ATATGAAAGCACTGATGATGAGGACCGACAGAGAATGAACAAATTAATGGAACTAGCAAATCTTCAGCCCAAAAGACCAA
AAACAATAAAGCAGCGCCATGTGAGAAAAAAGAGAAAAATAAGGGATATGTTGAATACACCTTTGTGTCCTTCACACAGC
AGTTTACATCCAGTGCTGTTACCTTCAGATGTATTTGACCAACCACAACCTGTAGGTAATAAAAGAATTGAATTCCATAT
ATCTACTGACATGCCAGCTGCATTTAAGAAAGATTTAGAGAAGGAACAAAATTGTGAGGAAAAAAATCATGATTTACCTG
CTACTGAAGTTGATGCATCCAATATAGGATTTGGAAAAATCTTCCCCAAACCTAATTTGGACATCACAGAGGAGATTAAA
GAAGACTCTGATGAAATGCCATCAGAATGTATTTCCAGAAGGGAATTGGAAAAGGGCAGAATTTCTAGAGAAGAAATGGA
AACACTTTCAGTTTTCAGAAGTTATGAACCTGGTGAACCAAACTGTAGAATTTATGTAAAGAATTTAGCTAAACATGTTC
AAGAAAAGGACCTTAAATATATTTTTGGAAGATATGTTGACTTTTCATCAGAAACACAGCGGATCATGTTTGATATACGT
TTGATGAAAGAAGGTCGTATGAAAGGACAAGCTTTCATTGGACTTCCTAATGAAAAAGCAGCAACAAAAGCCTTAAAGGA
AGCTAACGGATATGTGCTTTTTGGAAAACCCATGGTGGTTCAGTTTGCTCGATCTGCTAGACCAAAACAAGATCCTAAGG
AAGGAAAAAGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .14 RPM
SRP007412_brain 30 .37 RPM
SRP007412_cerebellum 52 .89 RPM
SRP007412_heart 9 .01 RPM
SRP007412_kidney 22 .77 RPM
SRP007412_liver 7 .05 RPM
SRP007412_testis 4 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000035686 ortholog_one2one 1 retrogene
retro_cjac_1397,
Homo sapiens ENSG00000185946 ortholog_one2one 1 retrogene
retro_hsap_2800,
Nomascus leucogenys ENSNLEG00000012013 possible_ortholog 1 retrogene
retro_nleu_1539,
Nomascus leucogenys ENSNLEG00000015566 ortholog_one2one 1 retrogene
retro_nleu_1538,
Pongo abelii ENSPPYG00000001102 ortholog_one2one 1 retrogene
retro_pabe_2224,
Pan troglodytes ENSPTRG00000033902 ortholog_one2one 1 retrogene
retro_ptro_1897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1435 84.63 73.18
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Download FASTA sequences of all ENSMMUG00000018039 retrocopies