Parental gene:

RNPC3, ENSCJAG00000035686

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:7:139762997..139791530(+)


>ENSCJAG00000035686
ATGGCAGCTCCCGAGCAGCCGCTTGTAATATCAAGGGGATGCACGAGCTCCTCCTCGGTTTCCCCGCCTCGGGGCGACCG
AACCCTTCTGGTGAGGCACCTGCCGGCTGAGCTGACCGCTGAGGAGAAAGAGGACTTGTTGAAGTACTTCGGAGCGCAGT
CGGTGCGCGTCCTGTCAGATAAGGGGCGACTGAAACATACAGCTTTTGCCACATTCCCTAATGAAAAAGCAGCTATAAAG
GCATTGACAAGACTCCATCAGCTGAAACTTTTAGGTCATACTTTAGTCGTTGAATTTGCAAAAGAGCAAGATCGTGTTCA
CTCCCCATGTCCCACTTCAGTCTCTGAAAAAAAAAAAAGGTCTGATGACCCTGTTGAAGATGATAAAGAAAAGAAAGAAC
TGGGTTATTTAACCATAGAAAATGGAATTGCACCAAACCATGGGCTGACTTTTCCTTTAAATTCATGTCTCAAGTATATG
TACCCACCACCTTCCAGCACAATCCTAGCAAACATAGTAAATGCTTTGGCAAGCGTGCCTAAGTTCTATGTACAGGTCCT
TCATCTTATGAATAAAATGAATTTGCCCACACCTTTTGGACCAATTACTGCACGACCTCCCATGTATGAAGACTATATGC
CATTGCATGCACCTCTTCCACCCACATCTCCCCAGCCACCTGAGGAACCTCCTTTGCCAGACGAGGATGAAGAATTATCT
AGTGCAGAATCAGAATATGAAAGCAGTGATGATGAGGACAGACAGAGAATGAACAAACTAATGGAACTAGCAAATCTTCA
GCCCAAAAGACCCAAAACAATAAAGCAACGCCGTGTGAGGAAAAAGAGAAAAATAAAGGATATGTTGAATACACCTTTGT
GTCCTTCACACAGCAGTTTACATCCAGTGCTGTTACCTTCAGACGTATTTGACCAACCACAACCTGTAGGCCATAAAAGA
ATTGAATTCCATATATCTACTGACATGCCAGCTGCATTTAAGAAAGATTTAGAGAAGGAACAAAATCGTGAGGAAAAAGA
TCATGATATACCTGCTACTGAAGTTGATGCATCCAATATAGGATTCGGAAAAATCTTCCCCAAACCTAATTTGAATATCA
CAGAGGAAATTAAAGAAGACTCTGATGAAATGCCATCAGAATGTATTTCTAGAAGGGAATTGGAAAAGGGCAGAATTTCT
AGAGAAGAAATGGAAACACTTTCAGTTTTCAGAAGTTATGAACCTGGTGAACCAAACTGTAGAATTTATGTAAAGAATTT
AGCTAAACATGTTCAAGAAAAGGACCTTAAATATATTTTTGGAAGATATGTTGACTTTTCATCAGAAACACAGCGGATCA
TGTTTGATATACGTTTGATGAAAGAAGGTCGTATGAAAGGACAGGCTTTCATTGGACTTCCTAATGAGAAAGCAGCAGCA
AAAGCCTTAAAGGAAGCTAACGGATATGTGCTTTTTGGAAAACCCATGGTGGTTCAATTTGCTCGATCTGCTAGACCAAA
GCAAGATCCCAAGGAAGGAAAAAGAAAGTGTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 21 .79 RPM
SRP051959_skeletal_muscle 39 .26 RPM
SRP051959_lymph_node 19 .75 RPM
SRP051959_lung 19 .16 RPM
SRP051959_liver 20 .62 RPM
SRP051959_kidney 17 .73 RPM
SRP051959_heart 18 .14 RPM
SRP051959_colon 8 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000185946 ortholog_one2one 1 retrogene
retro_hsap_2800,
Macaca mulatta ENSMMUG00000018039 ortholog_one2one 1 retrogene
retro_mmul_1435,
Nomascus leucogenys ENSNLEG00000012013 possible_ortholog 1 retrogene
retro_nleu_1539,
Nomascus leucogenys ENSNLEG00000015566 ortholog_one2one 1 retrogene
retro_nleu_1538,
Pongo abelii ENSPPYG00000001102 ortholog_one2one 1 retrogene
retro_pabe_2224,
Pan troglodytes ENSPTRG00000033902 ortholog_one2one 1 retrogene
retro_ptro_1897,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1397 72.03 54.93
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Download FASTA sequences of all ENSCJAG00000035686 retrocopies