Parental gene:

NUS1, ENSPTRG00000018547

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:118804272..118840210(+)


>ENSPTRG00000018547
ATGACGGGGCTGTACGAGCTGGTGTGGCGGGTGCTGCACGCGCTGCTCTGTCTGCACCGCACGCTCACCTCCTGGCTCCG
CGTTCGGTTCGGCACCTGGAACTGGATCTGGCGGCGCTGCTGCCGCGCCGCCTCTGCCGCGGTCCTAGCGCCGCTCGGCT
TCACGCTCCGCAAGTCCCCGGCAGTCGGCAGGAACCGCCGTCACCACCGGCACCCGCGCGGGGGGTCGTGCCTGGCAGCC
GCACACCACCGGATGCGCTGGCGCGCGGACGGTCGTTCCTTGGAGAAGCTGCCTGTGCATATGGGCCTGGTGATCACCGA
GGTGGAGCAAGAACCCAGCTTCTCGGACATCGCGAGCCTAGTGGTGTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACAACAGCAAGAACTTCTG
GGCCTAGATTGTTCAAAATACTCACCAGAATTTGCAAATAGTAATGACAAAGATGATCAAGTTTCAAATTGCCATTTGGC
AGTGAAGGTGCTGTCTCCGGAAGATGGAAAAGCAGATATTGTAAGAGCTGCTCAGGACTTTTGCCAGTTAGTAGCCCAGA
AGCAAAAGAGACCCACAGATTTGGATGTAGATACGTTAGGCAGTTTACTTAGTTCAAATGGTTGTCCTGATCCTGATTTA
GTATTGAAGTTCGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCACATCAGATTGACTGAGATTGTCTCTTTGCC
TTCCCACCTAAACATCAGTTATGAGGACTTTTTCTCTGCCCTTCGTCAATATGCAGCCTGTGAACAGCGTCTGGGAAAGT
AG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 18 .82 RPM
SRP007412_cerebellum 8 .17 RPM
SRP007412_heart 6 .73 RPM
SRP007412_kidney 19 .56 RPM
SRP007412_liver 11 .46 RPM
SRP007412_testis 5 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000001780 ortholog_one2many 1 retrogene
retro_dnov_1639,
Erinaceus europaeus ENSEEUG00000008948 ortholog_one2many 1 retrogene
retro_eeur_443,
Homo sapiens ENSG00000153989 ortholog_one2many 4 retrogenes
retro_hsap_1174, retro_hsap_1176, retro_hsap_1289, retro_hsap_4825,
Gorilla gorilla ENSGGOG00000022321 ortholog_one2many 4 retrogenes
retro_ggor_1012, retro_ggor_914, retro_ggor_915, retro_ggor_993,
Microcebus murinus ENSMICG00000007831 ortholog_one2many 1 retrogene
retro_mmur_423,
Nomascus leucogenys ENSNLEG00000013457 ortholog_one2many 1 retrogene
retro_nleu_2411,
Oryctolagus cuniculus ENSOCUG00000011553 ortholog_one2many 1 retrogene
retro_ocun_1713,
Pongo abelii ENSPPYG00000025886 ortholog_one2many 1 retrogene
retro_pabe_81,
Tarsius syrichta ENSTSYG00000003212 ortholog_one2many 1 retrogene
retro_tsyr_633,
Tursiops truncatus ENSTTRG00000007352 ortholog_one2many 2 retrogenes
retro_ttru_358, retro_ttru_684,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_808 84.15 62.46
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Download FASTA sequences of all ENSPTRG00000018547 retrocopies