Parental gene:

NUS1, ENSDNOG00000001780

Aliases:None
Description:nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21042]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4445:40217..98831(+)


>ENSDNOG00000001780
ATGACGGGGCTGTATGAACTGGTGTGGCGGGTGCTGCACGCCTTGCTCTGTCTGCACCGCACGCTCACCTCCTGGCTCCG
CGTTCGGTTCGGCACTTGGAACTGGATCTGGCGGCGCTGTTGTCGCGCCGCCTCCGCCGCGGTCCTAGCGCCGCTCGGCT
TCACGCTCCGCAAGCCCCCGGCTGCCGGCAGAAACCGCCGGCACTACCGGCACCCGCGTGAGGGGCCAGGGCCGGCCGCC
GCCCACCCCAGGCTCCGCTGGCGCGCGGACGGCCGTTCCCTGGAGAAGCTGCCGGTGCACATGGGCCTGGTGATCACTGA
GGAGGAGCAGGAGCCCAGCTTCTCGGACATCGCAAGCCTTGTGGTGTGGTGTATGGCCGTGGGCATCTCCTACATTAGCG
TCTACGACCACCAAGGTATTTTCAAAAGAAATAATTCCAGATTGATGGATGAAATTTTAAAACAACAGCAGGAACTTCTT
GGCTTAGATTGTTCCAAATATTCACCAGAGTTTGCAAATAGTAATGACAAAGATGATCAAGTTTTAGATTGCCAATCTGC
AGTGATGGTGCTGTCCCCAGAAGATGGAAAAGCAGATATTGTGAGAGCTGCACGTGACTTTTGTCAGTTAGTAGCCCAGC
AGCAAAAGAGATCCACAGATTTGGATGTGGATATGTTAAACAGTTTACTTAGTTCACGTGGTTTCCCTGATCCTGATTTA
GTACTGAAGTTTGGTCCTGTGGACAGCACATTAGGCTTTCTTCCCTGGCATATCAGATTGACTGAGATT

Library Parental gene expression (RPM)
SRP012922_ascending_colon 8 .95 RPM
SRP012922_cerebellum 2 .61 RPM
SRP012922_heart 0 .70 RPM
SRP012922_kidney 3 .29 RPM
SRP012922_liver 1 .24 RPM
SRP012922_lung 3 .36 RPM
SRP012922_quadricep_muscle 1 .56 RPM
SRP012922_spleen 3 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000008948 ortholog_one2one 1 retrogene
retro_eeur_443,
Homo sapiens ENSG00000153989 ortholog_one2one 4 retrogenes
retro_hsap_1174, retro_hsap_1176, retro_hsap_1289, retro_hsap_4825,
Gorilla gorilla ENSGGOG00000022321 ortholog_one2one 4 retrogenes
retro_ggor_1012, retro_ggor_914, retro_ggor_915, retro_ggor_993,
Microcebus murinus ENSMICG00000007831 ortholog_one2one 1 retrogene
retro_mmur_423,
Nomascus leucogenys ENSNLEG00000013457 ortholog_one2one 1 retrogene
retro_nleu_2411,
Oryctolagus cuniculus ENSOCUG00000011553 ortholog_one2one 1 retrogene
retro_ocun_1713,
Pongo abelii ENSPPYG00000025886 ortholog_one2many 1 retrogene
retro_pabe_81,
Pan troglodytes ENSPTRG00000018547 ortholog_one2many 1 retrogene
retro_ptro_808,
Tarsius syrichta ENSTSYG00000003212 ortholog_one2one 1 retrogene
retro_tsyr_633,
Tursiops truncatus ENSTTRG00000007352 ortholog_one2one 2 retrogenes
retro_ttru_358, retro_ttru_684,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1639 99.42 65.02
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Download FASTA sequences of all ENSDNOG00000001780 retrocopies