Parental gene:

BOD1, ENSPTRG00000017544

Aliases:None
Description:biorientation of chromosomes in cell division 1 [Source:HGNC Symbol;Acc:25114]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:174643007..174650204(-)


>ENSPTRG00000017544
ATGGCGGACGGCGGCGGCGGCGGCGGCGGCGGAACTAGCCAGGCCTCTGCCGGGGCCAGCCGGGGCCTTTTTGACAGCTT
CCGCCGGGACTGCCTGGCCGACGTGGACACCAAGCCAGCTTACCAAAACCTGAGGCAGAAAGTGGATAATTTTGTGTCAA
CACATCTGGACAAGCAGGAATGGAATCCTACGATGAACAAAAACCAATTGCGAAATGGTCTGAGGCAGAGTGTGGTTCAG
TCAGGGATGTTGGAAGCTGGAGTAGACAGGATTATTTCTCAGGTGGTGGATCCAAAACTTAACCACATCTTCAGGCCACA
AATAGAACGAGCAATTCATGAGTTCCTGGCGGCCCAGAAAAAAGCAGCTGTGCCAGCACCCCCTCCAGAGCCCGAAGGCC
AGGACCCTCCAGCTCCATCTCAGGACACTTCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .01 RPM
SRP007412_cerebellum 10 .22 RPM
SRP007412_heart 10 .14 RPM
SRP007412_kidney 8 .76 RPM
SRP007412_liver 8 .48 RPM
SRP007412_testis 24 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034598 ortholog_one2many 1 retrogene
retro_btau_663,
Canis familiaris ENSCAFG00000016776 ortholog_one2many 1 retrogene
retro_cfam_1374,
Callithrix jacchus ENSCJAG00000031971 ortholog_one2many 4 retrogenes
retro_cjac_1154, retro_cjac_1515, retro_cjac_1536, retro_cjac_953,
Homo sapiens ENSG00000145919 ortholog_one2one 3 retrogenes
retro_hsap_102, retro_hsap_1867, retro_hsap_993,
Gorilla gorilla ENSGGOG00000010925 ortholog_one2one 2 retrogenes
retro_ggor_1365, retro_ggor_794,
Microcebus murinus ENSMICG00000002626 ortholog_one2many 1 retrogene
retro_mmur_1126,
Macaca mulatta ENSMMUG00000013793 ortholog_one2one 2 retrogenes
retro_mmul_803, retro_mmul_869,
Mus musculus ENSMUSG00000044502 ortholog_one2many 1 retrogene
retro_mmus_3661,
Nomascus leucogenys ENSNLEG00000000476 ortholog_one2one 1 retrogene
retro_nleu_1224,
Oryctolagus cuniculus ENSOCUG00000014283 ortholog_many2many 1 retrogene
retro_ocun_1071,
Otolemur garnettii ENSOGAG00000001107 ortholog_one2many 3 retrogenes
retro_ogar_1477, retro_ogar_2663, retro_ogar_3112,
Pongo abelii ENSPPYG00000016057 ortholog_one2one 2 retrogenes
retro_pabe_1567, retro_pabe_1587,
Ictidomys tridecemlineatus ENSSTOG00000013505 ortholog_one2many 1 retrogene
retro_itri_1164,
Tupaia belangeri ENSTBEG00000014046 ortholog_one2many 1 retrogene
retro_tbel_3451,
Tarsius syrichta ENSTSYG00000007617 ortholog_one2many 1 retrogene
retro_tsyr_818,
Tursiops truncatus ENSTTRG00000000384 ortholog_one2many 2 retrogenes
retro_ttru_1004, retro_ttru_457,
Vicugna pacos ENSVPAG00000004260 ortholog_one2many 1 retrogene
retro_vpac_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_757 66.41 87.50
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_1282 64.39 91.67
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000017544 retrocopies