Parental gene:

MMU.2549, ENSMMUG00000013793

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:170012576..170019899(-)


>ENSMMUG00000013793
ATGGCGGACGGCGGCGGCGGCGGGGGAACGGGCGCGGTGGGCGGTGGCGGAGCGGGCCAGGCCTCTGCCGGGGCAGCGAC
TGGCGCTACTGGGGCCAGCGGGGGCGGTGGCCCCATCAACCCGGCCTCGCTGCCACCCGGCGACCCGCAGCTCATCGCTC
TCATCGTGGAGCAGCTCAAGAGCCGGGGCCTTTTTGACAGCTTCCGCCGGGACTGCCTGGCCGACGTGGACACCAAGCCA
GCTTACCAAAACCTGAGGCAGAAAGTGGATAATTTTGTGTCAACACATCTGGACAAGCAGGAATGGAATCCTACAATGAA
CAAAAACCAATTGCGAAATGGTCTGAGGCAGAGTGTGGTTCAGTCAGGGATGTTGGAAGCTGGAGTAGACAGGATTATTT
CTCAGGTGGTGGATCCAAAACTTAACCACATCTTCAGGCCACAAATAGAACGAGCAATTCATGAGTTCCTGGCGGCCCAG
AAAAAAGCAGCTGTGCCAGCACCCCCTCCAGAGCCTGAAGGCCAGGACCCTCCAGCTCCATCTCAGGACACTTCCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .55 RPM
SRP007412_brain 5 .38 RPM
SRP007412_cerebellum 3 .94 RPM
SRP007412_heart 8 .19 RPM
SRP007412_kidney 3 .17 RPM
SRP007412_liver 2 .69 RPM
SRP007412_testis 14 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034598 ortholog_one2many 1 retrogene
retro_btau_663,
Canis familiaris ENSCAFG00000016776 ortholog_one2many 1 retrogene
retro_cfam_1374,
Callithrix jacchus ENSCJAG00000031971 ortholog_one2many 4 retrogenes
retro_cjac_1154, retro_cjac_1515, retro_cjac_1536, retro_cjac_953,
Homo sapiens ENSG00000145919 ortholog_one2one 3 retrogenes
retro_hsap_102, retro_hsap_1867, retro_hsap_993,
Gorilla gorilla ENSGGOG00000010925 ortholog_one2one 2 retrogenes
retro_ggor_1365, retro_ggor_794,
Microcebus murinus ENSMICG00000002626 ortholog_one2many 1 retrogene
retro_mmur_1126,
Mus musculus ENSMUSG00000044502 ortholog_one2many 1 retrogene
retro_mmus_3661,
Nomascus leucogenys ENSNLEG00000000476 ortholog_one2one 1 retrogene
retro_nleu_1224,
Oryctolagus cuniculus ENSOCUG00000014283 ortholog_many2many 1 retrogene
retro_ocun_1071,
Otolemur garnettii ENSOGAG00000001107 ortholog_one2many 3 retrogenes
retro_ogar_1477, retro_ogar_2663, retro_ogar_3112,
Pongo abelii ENSPPYG00000016057 ortholog_one2one 2 retrogenes
retro_pabe_1567, retro_pabe_1587,
Pan troglodytes ENSPTRG00000017544 ortholog_one2one 2 retrogenes
retro_ptro_1282, retro_ptro_757,
Ictidomys tridecemlineatus ENSSTOG00000013505 ortholog_one2many 1 retrogene
retro_itri_1164,
Tupaia belangeri ENSTBEG00000014046 ortholog_one2many 1 retrogene
retro_tbel_3451,
Tarsius syrichta ENSTSYG00000007617 ortholog_one2many 1 retrogene
retro_tsyr_818,
Tursiops truncatus ENSTTRG00000000384 ortholog_one2many 2 retrogenes
retro_ttru_1004, retro_ttru_457,
Vicugna pacos ENSVPAG00000004260 ortholog_one2many 1 retrogene
retro_vpac_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_803 66.91 74.05
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2. retro_mmul_869 92.43 100.00
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Download FASTA sequences of all ENSMMUG00000013793 retrocopies