Parental gene:

SEPT11, ENSPTRG00000016192

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:53020332..53109364(-)


>ENSPTRG00000016192
ATGGCCGTGGCCGTGGGGAGACCGTCTAATGAAGAGCTTCGAAACTTGTCTTTGTCTGGCCATGTGGGATTTGACAGCCT
CCCTGACCAGCTGGTCAACAAGTCTACTTCTCAAGGATTCTGTTTCAACATCCTTTGTGTTGGTGAGACAGGCATTGGCA
AATCCACGTTAATGGACACTTTGTTCAACACCAAATTTGAAAGTGACCCAGCTACTCACAATGAACCAGGTGTTCGGTTA
AAAGCCAGAAGTTATGAGCTTCAGGAAAGCAATGTACGGCTGAAGTTAACCATTGTTGACACCGTGGGATTTGGAGACCA
GATAAATAAAGATGACAGCTATAAGCCGATAGTAGAATATATTGATGCCCAGTTCGAGGCCTACCTGCAAGAGGAATTGA
AGATTAAACGTTCTCTCTTCAACTACCATGACACGAGGATCCATGCCTGCCTCTACTTTATTGCCCCTACTGGACATTCA
CTAAAGTCCCTGGATCTGGTCACCATGAAAAAGCTGGACAGTAAGGTGAACATCATTCCAATAATTGCAAAAGCTGACAC
CATTGCCAAGAATGAACTGCACAAATTCAAGAGTAAGATCATGAGTGAACTGGTCAGCAATGGGGTCCAGATATATCAGT
TTCCCACTGATGAAGAAACGGTGGCAGAGATTAACGCAACAATGAGTGTCCATCTCCCATTTGCAGTGGTTGGCAGCACC
GAAGAGGTGAAGATTGGCAACAAGATGGCAAAGGCCAGGCAGTACCCCTGGGGTGTGGTGCAGGTTGAGAATGAAAATCA
TTGCGATTTTGTGAAACTTCGAGAGATGCTGATCCGGGTGAACATGGAGGACTTGCGAGAGCAGACTCACACCCGCCACT
ATGAATTGTACCGACGCTGTAAGCTTGAAGAGATGGGGTTCAAGGACACTGACCCTGACAGCAAACCCTTCAGTCTTCAG
GAGACATATGAAGCAAAAAGGAATGAATTCCTGGGAGAACTGCAGAAGAAAGAAGAAGAAATGAGACAAATGTTTGTTAT
GAGAGTGAAGGAGAAAGAAGCTGAACTTAAGGAGGCAGAGAAAGAGCTTCACGAGAAGTTTGACCTTCTAAAGCGGACAC
ACCAAGAAGAAAAGAAGAAAGTGGAAGACAAGAAGAAGGAGCTTGAGGAGGAGGTGAACAACTTCCAGAAGAAGAAAGCA
GCGGCTCAGTTACTACAGTCCCAGGCCCAGCAATCTGGGGCCCAGCAAACCAAGAAAGACAAGGATAAGAAAAATGCAAG
CTTCACATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 65 .17 RPM
SRP007412_cerebellum 61 .27 RPM
SRP007412_heart 34 .22 RPM
SRP007412_kidney 78 .22 RPM
SRP007412_liver 30 .77 RPM
SRP007412_testis 12 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003906 ortholog_one2one 1 retrogene
retro_chof_1543,
Callithrix jacchus ENSCJAG00000014744 ortholog_one2one 1 retrogene
retro_cjac_2336,
Monodelphis domestica ENSMODG00000011825 ortholog_one2one 1 retrogene
retro_mdom_224,
Oryctolagus cuniculus ENSOCUG00000001289 ortholog_one2one 1 retrogene
retro_ocun_1758,
Otolemur garnettii ENSOGAG00000005210 ortholog_one2one 1 retrogene
retro_ogar_2831,
Pan troglodytes ENSPTRG00000019080 other_paralog 2 retrogenes
retro_ptro_2585, retro_ptro_2853,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2753 70.13 89.74
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Download FASTA sequences of all ENSPTRG00000016192 retrocopies