Parental gene: | GYG1, ENSPTRG00000015509 |
| Aliases: | None |
| Description: | glycogenin 1 [Source:HGNC Symbol;Acc:4699] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 3:152635020..152671466(+) |
>ENSPTRG00000015509
ATGACAGATCAGGCCTTTGTGACACTAACCACAAACGATGCCTATGCCAAAGGTGCCCTGGTCCTGGGATCATCTCTGAA
ACAGCACAGGACCACCAGGAGGCTGGTCGTGCTCGCCACCCCTCAGGTCTCAAACTCCATGAGAAAAGTTTTAGAGACAG
TCTTTGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAACCTTAATGAAGAGGCCAGAGTTG
GGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATACTCTGGT
CCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTCAATT
CCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGCTTCTGAGCAAGGTAGTTTTGAT
GGTGGGGACCAAGGCATACTGAACACATTTTTTAGCAGCTGGGCAACAACAGATATCAGAAAACACCTGCCGTTTATTTA
TAACCTAAGCAGCATCTCTATATACTCCTACCTCCCGGCATTTAAAGTGTTTGGTGCAAGTGCCAAAGTTGTGCATTTCC
TGGGACGAGTCAAACCATGGAATTATACTTATGATCCCAAAACAAAAAGTGTCAAAAGTGAGGCCCATGATCCCAACATG
ACTCATCCAGAGTTTCTCATCCTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCTGCTTCAACAATTTGGCCTTGT
CAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGG
AAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCGTTTGTATCCTCGGAAGAA
CGGAAGGAACGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACAC
TTACCTCCAGTAG
ATGACAGATCAGGCCTTTGTGACACTAACCACAAACGATGCCTATGCCAAAGGTGCCCTGGTCCTGGGATCATCTCTGAA
ACAGCACAGGACCACCAGGAGGCTGGTCGTGCTCGCCACCCCTCAGGTCTCAAACTCCATGAGAAAAGTTTTAGAGACAG
TCTTTGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAACCTTAATGAAGAGGCCAGAGTTG
GGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATACTCTGGT
CCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTCAATT
CCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGCTTCTGAGCAAGGTAGTTTTGAT
GGTGGGGACCAAGGCATACTGAACACATTTTTTAGCAGCTGGGCAACAACAGATATCAGAAAACACCTGCCGTTTATTTA
TAACCTAAGCAGCATCTCTATATACTCCTACCTCCCGGCATTTAAAGTGTTTGGTGCAAGTGCCAAAGTTGTGCATTTCC
TGGGACGAGTCAAACCATGGAATTATACTTATGATCCCAAAACAAAAAGTGTCAAAAGTGAGGCCCATGATCCCAACATG
ACTCATCCAGAGTTTCTCATCCTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCTGCTTCAACAATTTGGCCTTGT
CAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGG
AAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCGTTTGTATCCTCGGAAGAA
CGGAAGGAACGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACAC
TTACCTCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 24 .17 RPM |
| SRP007412_cerebellum | 19 .14 RPM |
| SRP007412_heart | 80 .24 RPM |
| SRP007412_kidney | 23 .93 RPM |
| SRP007412_liver | 14 .40 RPM |
| SRP007412_testis | 281 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001467 | ortholog_one2one | 2 retrogenes | |
| Danio rerio | ENSDARG00000011934 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000163754 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006382 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005521 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002557 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003516 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025899 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_836 | 80.68 | 74.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000015509 retrocopies