Parental gene:

GYG1, ENSOCUG00000003516

Aliases:GYG1, GYG
Description:glycogenin 1 (GYG1), mRNA [Source:RefSeq mRNA;Acc:NM_001082241]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:14:42793515..42828602(+)


>ENSOCUG00000003516
ATGAAAGATCAGGCCTTTGTGACACTGACCACAAACGATGCCTACGCCAAGGGTGCCCTGGTCCTGGGCTCATCCCTGAA
ACAGCATAGGACCTCCCGAAGGCTGGCCGTGCTCACCACCCCACAGGTCTCAGACACCATGAGAAAGGCTTTAGAGATAG
TCTTTGATGAAGTCATCACCGTGGACATCTTGGACAGTGGCGACTCTGCGCATCTCACCTTAATGAAGAGGCCTGAGTTG
GGTGTCACACTGACCAAACTGCACTGCTGGTCCCTTACTCAGTATTCAAAATGCGTGTTCATGGATGCAGATACTCTGGT
CCTGGCAAATATTGATGATCTTTTTGAGAGAGAAGAGCTGTCGGCTGCACCAGACCCAGGCTGGCCTGACTGCTTCAACT
CCGGGGTCTTTGTTTATCAGCCTTCAGTGGAAACCTATAATCAGCTGTTGCACGTTGCTTCTGAGCAAGGCAGTTTTGAT
GGTGGGGACCAGGGCTTACTGAACACATTTTTTAACAGCTGGGCAACAACAGATATCAGAAAACACCTGCCATTTATTTA
TAACCTAAGCAGCATTTCTATATACTCCTACCTCCCAGCATTCAAAGCGTTTGGTGCAAATGCCAAAGTTGTGCATTTCC
TGGGGCAAACTAAACCATGGAACTATACTTACGATACCAAAACAAAAAGTGTCAGAAGTGAGGGCCATGATCCCACCATG
ACTCATCCACAGTTTCTCAACGTGTGGTGGGACATCTTCACCACCAGTGTTGTACCTCTGCTTCAACAATTTGGCCTTGT
CCAAGATACCTGCTCATACCAACATGTGGAAGATGTCTCAGGAGCCGTATCACACTTGTCCCTTGGGGAGACCGCGGCCA
CCACACAACCTTTTGTGTCCTCAGAAGAACGGAAAGAGCGATGGGAACAGGGCCAGGCTGATTACATGGGAGCAGATTCC
TTTGACAACATCAAGAAGAAACTTGACACTTACCTCCAGTAG

Library Parental gene expression (RPM)
SRP017611_liver 5 .01 RPM
SRP017611_kidney 23 .51 RPM
SRP017611_brain 40 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001467 ortholog_one2one 2 retrogenes
retro_cjac_1049, retro_cjac_2915,
Danio rerio ENSDARG00000011934 ortholog_one2many 1 retrogene
retro_drer_23,
Homo sapiens ENSG00000163754 ortholog_one2one 2 retrogenes
retro_hsap_1222, retro_hsap_159,
Myotis lucifugus ENSMLUG00000006382 ortholog_one2one 1 retrogene
retro_mluc_2351,
Macaca mulatta ENSMMUG00000005521 ortholog_one2one 2 retrogenes
retro_mmul_1297, retro_mmul_376,
Nomascus leucogenys ENSNLEG00000002557 ortholog_one2one 2 retrogenes
retro_nleu_1556, retro_nleu_693,
Pongo abelii ENSPPYG00000025899 ortholog_one2one 2 retrogenes
retro_pabe_1015, retro_pabe_1080,
Pan troglodytes ENSPTRG00000015509 ortholog_one2one 1 retrogene
retro_ptro_836,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1766 87.43 50.15
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Download FASTA sequences of all ENSOCUG00000003516 retrocopies