Parental gene: | GYG1, ENSCJAG00000001467 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 17:28205654..28244939(-) |
>ENSCJAG00000001467
ATGACAGATCAGGCCTTTGTGACACTGACCACAAACGATGCCTACGCCAAAGGTGCCCTAGTCTTGGGCTCATCTCTGAA
ACAGCACAGGACCACCAGGAAGCTGGTCGTGCTTGCCACCCCACAGGTCTCAGACTCCATGAGAAAAGTTTTAGAGACAG
TCTTTGATGAAGTCATCGTGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAACCTTAATGAAGAGGCCAGAGTTG
GGTGTCACGCTGACAAAGCTCCACTGCTGGTCACTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATACTCTGGT
CCTAGCAAATATTGACGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTTAATT
CTGGAGTTTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGCTTCTGAGCAAGGTAGTTTTGAT
GGTGGGGACCAAGGCATACTGAACACGTTTTTTAGCAGCTGGGCAACAACAGATATCAGAAAACACCTGCCGTTTATTTA
TAACCTAAGCAGCATCTCTATATATTCCTACCTCCCAGCATTTAAAGTGTTTGGTGCAAGTGCGAAAGTTGTGCATTTCC
TGGGAAGAGTCAAACCATGGAATTATACTTACGATCCCAAAACAAAAAGTGTCAAAAGTGAGTCCCATGATCCCAACATG
ACTCATCCAGAGTTTCTTATCTTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCTGCTTCAACAATTTGGCCTTGT
CAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGG
AAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCTTTTGTATCCTCGGAAGAA
CGGAAGGAGCGGTGGGAACAAGGCCAGGCCGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACAC
TTACCTCCAGTAG
ATGACAGATCAGGCCTTTGTGACACTGACCACAAACGATGCCTACGCCAAAGGTGCCCTAGTCTTGGGCTCATCTCTGAA
ACAGCACAGGACCACCAGGAAGCTGGTCGTGCTTGCCACCCCACAGGTCTCAGACTCCATGAGAAAAGTTTTAGAGACAG
TCTTTGATGAAGTCATCGTGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAACCTTAATGAAGAGGCCAGAGTTG
GGTGTCACGCTGACAAAGCTCCACTGCTGGTCACTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATACTCTGGT
CCTAGCAAATATTGACGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTTAATT
CTGGAGTTTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGCTTCTGAGCAAGGTAGTTTTGAT
GGTGGGGACCAAGGCATACTGAACACGTTTTTTAGCAGCTGGGCAACAACAGATATCAGAAAACACCTGCCGTTTATTTA
TAACCTAAGCAGCATCTCTATATATTCCTACCTCCCAGCATTTAAAGTGTTTGGTGCAAGTGCGAAAGTTGTGCATTTCC
TGGGAAGAGTCAAACCATGGAATTATACTTACGATCCCAAAACAAAAAGTGTCAAAAGTGAGTCCCATGATCCCAACATG
ACTCATCCAGAGTTTCTTATCTTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCTGCTTCAACAATTTGGCCTTGT
CAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGG
AAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCTTTTGTATCCTCGGAAGAA
CGGAAGGAGCGGTGGGAACAAGGCCAGGCCGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACAC
TTACCTCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 16 .81 RPM |
| SRP051959_skeletal_muscle | 152 .58 RPM |
| SRP051959_lymph_node | 9 .27 RPM |
| SRP051959_lung | 12 .30 RPM |
| SRP051959_liver | 5 .96 RPM |
| SRP051959_kidney | 14 .31 RPM |
| SRP051959_heart | 28 .45 RPM |
| SRP051959_colon | 7 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Danio rerio | ENSDARG00000011934 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000163754 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006382 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005521 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002557 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003516 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025899 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000015509 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1049 | 93.53 | 78.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2915 | 87.05 | 78.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001467 retrocopies