Parental gene:

AURKA, ENSPTRG00000013646

Aliases:None
Description:Pan troglodytes aurora kinase A (AURKA), mRNA. [Source:RefSeq mRNA;Acc:NM_001246616]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:20:53527334..53550126(-)


>ENSPTRG00000013646
ATGGACCGATCTAAAGAAAACTGCATTTCAGGGCCTGTTAAGGCTACAGCTCCAGTTGGAGGTCCAAAACGTGTTCTCGT
GACTCAGCAATTTCCTTGTCAGAATCCATTACCTGTAAATAGTGGCCAGGCTCAGCGGGTCCTGTGTCCTTCAAATTCTT
CCCAGCGCGTTCCTTTGCAAGCACAAAAGCTTGTCTCCAGTCACAAGCCGGTTCAGAATCAGAAGCAGAAGCAATTGCAG
GCAACCAGTGTACCTCATCCTGTCTCCAGGCCACTGAATAACACCCAAAAGAGCAAGCAGCCCCTGCCGTCGGCACCTGA
AAATAATCCTGAGGAGGAACTGGCATCAAAACAGAAAAATGAAGAATCAAAAAAGAGGCAGTGGGCTTTGGAAGACTTTG
AAATTGGTCGCCCTCTGGGTAAAGGAAAGTTTGGTAATGTTTATTTGGCAAGAGAAAAGCAAAGCAAGTTTATTCTGGCT
CTTAAAGTGTTATTTAAAGCTCAGCTGGAGAAAGCCGGAGTGGAGCATCAGCTCAGAAGAGAAGTAGAAATACAGTCCCA
CCTTAGGCATCCTAATATTCTTAGACTGTATGGTTATTTCCATGATGCTACCAGAGTCTACCTAATTCTGGAATATGCAC
CACTCGGAACAGTCTATAGAGAACTTCAGAAACTTTCAAAGTTTGATGAGCAGAGAACTGCTACTTATATAACAGAATTG
GCAAATGCCCTGTCTTACTGTCATTCGAAGAGAGTTATTCATAGAGACATTAAGCCAGAGAACTTACTTCTTGGATCAGC
TGGAGAGCTTAAAATTGCAGATTTTGGGTGGTCAGTACATGCTCCATCTTCCAGGAGGACCACTCTCTGTGGCACCCTGG
ACTACCTGCCCCCCGAAATGATTGAAGGTCGGATGCATGATGAGAAGGTGGATCTCTGGAGCCTTGGAGTTCTTTGCTAT
GAATTTTTAGTTGGGAAGCCTCCTTTTGAGGCAAACACATACCAAGAGACCTACAAAAGAATATCACGGGTTGAATTCAC
ATTCCCTGACTTTGTAACAGAGGGAGCCAGGGACCTCATTTCAAGACTGTTGAAGCATAATCCCAGCCAGAGGCCAATGC
TCAGAGAAGTACTTGAACACCCCTGGATCACAGCAAATTCATCAAAACCATCAAATTGCCAAAACAAAGAATCAGCTAGC
AAACAGTCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .88 RPM
SRP007412_cerebellum 2 .22 RPM
SRP007412_heart 1 .46 RPM
SRP007412_kidney 1 .60 RPM
SRP007412_liver 2 .39 RPM
SRP007412_testis 83 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029331 ortholog_one2one 3 retrogenes
retro_cfam_1027, retro_cfam_257, retro_cfam_764,
Choloepus hoffmanni ENSCHOG00000005976 ortholog_one2one 8 retrogenes
retro_chof_1302, retro_chof_1575, retro_chof_1709, retro_chof_2213, retro_chof_2389, retro_chof_259, retro_chof_565, retro_chof_764,
Cavia porcellus ENSCPOG00000006633 ortholog_one2many 1 retrogene
retro_cpor_106,
Felis catus ENSFCAG00000024493 ortholog_one2one 1 retrogene
retro_fcat_495,
Homo sapiens ENSG00000087586 ortholog_one2one 1 retrogene
retro_hsap_510,
Gorilla gorilla ENSGGOG00000007197 ortholog_one2one 1 retrogene
retro_ggor_470,
Myotis lucifugus ENSMLUG00000007925 ortholog_one2one 1 retrogene
retro_mluc_1931,
Macaca mulatta ENSMMUG00000000070 ortholog_one2one 1 retrogene
retro_mmul_431,
Mus musculus ENSMUSG00000027496 ortholog_one2one 1 retrogene
retro_mmus_2825,
Nomascus leucogenys ENSNLEG00000007029 ortholog_one2one 1 retrogene
retro_nleu_1553,
Otolemur garnettii ENSOGAG00000004441 ortholog_one2many 3 retrogenes
retro_ogar_2805, retro_ogar_3440, retro_ogar_980,
Pongo abelii ENSPPYG00000011148 ortholog_one2one 1 retrogene
retro_pabe_231,
Rattus norvegicus ENSRNOG00000004479 ortholog_one2one 2 retrogenes
retro_rnor_664, retro_rnor_670,
Sus scrofa ENSSSCG00000007493 ortholog_one2many 1 retrogene
retro_sscr_936,
Ictidomys tridecemlineatus ENSSTOG00000011958 ortholog_one2one 2 retrogenes
retro_itri_366, retro_itri_772,
Tupaia belangeri ENSTBEG00000013284 ortholog_one2one 2 retrogenes
retro_tbel_1137, retro_tbel_2604,
Tarsius syrichta ENSTSYG00000009221 ortholog_one2one 1 retrogene
retro_tsyr_378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_381 91.28 85.36
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Download FASTA sequences of all ENSPTRG00000013646 retrocopies