Parental gene: | RPS5, ENSPTRG00000011591 |
| Aliases: | None |
| Description: | ribosomal protein S5 [Source:HGNC Symbol;Acc:10426] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:63444726..63452273(+) |
>ENSPTRG00000011591
ATGACCGAGTGGGAGACAGCAGCACCAGCGGTGGCAGAGACCCCAGACATCAAGCTCTTTGGGAAGTGGAGCACCGATGA
TGTGCAGATCAATGACATTTCCCTGCAGGATTACATTGCAGTGAAGGAGAAGTATGCCAAGTACCTGCCTCACAGTGCAG
GGCGGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATTGTGGAGCGCCTCACTAACTCCATGATGATGCACGGC
CGCAACAACGGCAAGAAGCTCATGACTGTGCGCATCGTCAAGCATGCCTTCGAGATCATACACCTGCTCACAGGCGAGAA
CCCTCTGCAGGTCCTGGTGAACGCCATCATCAACAGTGGTCCCCGGGAGGACTCCACACGCATTGGGCGCGCCGGGACTG
TGAGACGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGCCATCTGGCTGCTGTGCACAGGCGCTCGTGAG
GCTGCCTTCCGGAACATTAAGACCATTGCTGAGTGCCTGGCAGATGAGCTCATCAATGCTGCCAAGGGCTCCTCGAACTC
CTATGCCATTAAGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGA
ATGACCGAGTGGGAGACAGCAGCACCAGCGGTGGCAGAGACCCCAGACATCAAGCTCTTTGGGAAGTGGAGCACCGATGA
TGTGCAGATCAATGACATTTCCCTGCAGGATTACATTGCAGTGAAGGAGAAGTATGCCAAGTACCTGCCTCACAGTGCAG
GGCGGTATGCCGCCAAACGCTTCCGCAAAGCTCAGTGTCCCATTGTGGAGCGCCTCACTAACTCCATGATGATGCACGGC
CGCAACAACGGCAAGAAGCTCATGACTGTGCGCATCGTCAAGCATGCCTTCGAGATCATACACCTGCTCACAGGCGAGAA
CCCTCTGCAGGTCCTGGTGAACGCCATCATCAACAGTGGTCCCCGGGAGGACTCCACACGCATTGGGCGCGCCGGGACTG
TGAGACGACAGGCTGTGGATGTGTCCCCCCTGCGCCGTGTGAACCAGGCCATCTGGCTGCTGTGCACAGGCGCTCGTGAG
GCTGCCTTCCGGAACATTAAGACCATTGCTGAGTGCCTGGCAGATGAGCTCATCAATGCTGCCAAGGGCTCCTCGAACTC
CTATGCCATTAAGAAGAAGGACGAGCTGGAGCGTGTGGCCAAGTCCAACCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 140 .24 RPM |
| SRP007412_cerebellum | 130 .70 RPM |
| SRP007412_heart | 66 .74 RPM |
| SRP007412_kidney | 286 .75 RPM |
| SRP007412_liver | 233 .10 RPM |
| SRP007412_testis | 37 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002366 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000000304 | ortholog_one2one | 6 retrogenes | |
| Echinops telfairi | ENSETEG00000013543 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000083845 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004258 | ortholog_one2one | 4 retrogenes | |
| Macropus eugenii | ENSMEUG00000015400 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000012641 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008729 | ortholog_one2one | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000008308 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000011921 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013088 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000011034 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000010500 | ortholog_one2one | 7 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000005935 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016955 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000000076 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000001991 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1469 | 81.86 | 99.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1471 | 79.12 | 88.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_2474 | 94.59 | 72.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_2700 | 87.72 | 83.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_2868 | 75.98 | 99.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ptro_3152 | 69.91 | 54.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000011591 retrocopies