Parental gene:

RPS9, ENSPTRG00000011449

Aliases:None
Description:ribosomal protein S9 [Source:HGNC Symbol;Acc:10442]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:19:59108803..59115148(+)


>ENSPTRG00000011449
ATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTCGTCTCGACCA
AGAGCTGAAGCTGATCGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAAATTTACCCTGGCCAAGATCC
GCAAGGCCGCTCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGTCTGTTCGAAGGCAATGCCCTGCTGCGGCGG
CTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGCTGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGA
GAGACGCCTGCAGACCCAGGTCTTCAAGCTGGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCC
ATATCAGGGTCCGCAAGCAGGTGGTGAACATCCCATCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCT
CTGCGCTCTCCCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGC
TGGAGACGACGAGGAGGAGGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 199 .19 RPM
SRP007412_cerebellum 111 .60 RPM
SRP007412_heart 74 .88 RPM
SRP007412_kidney 241 .38 RPM
SRP007412_liver 194 .47 RPM
SRP007412_testis 53 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000001130 possible_ortholog 3 retrogenes
retro_cjac_2034, retro_cjac_2993, retro_cjac_719,
Cavia porcellus ENSCPOG00000020893 possible_ortholog 2 retrogenes
retro_cpor_1457, retro_cpor_407,
Gorilla gorilla ENSGGOG00000027839 ortholog_one2one 4 retrogenes
retro_ggor_1491, retro_ggor_160, retro_ggor_2190, retro_ggor_32,
Mustela putorius furo ENSMPUG00000010394 possible_ortholog 1 retrogene
retro_mputfur_128,
Mus musculus ENSMUSG00000006333 ortholog_one2one 2 retrogenes
retro_mmus_3082, retro_mmus_526,
Nomascus leucogenys ENSNLEG00000006314 possible_ortholog 1 retrogene
retro_nleu_91,
Rattus norvegicus ENSRNOG00000011355 possible_ortholog 7 retrogenes
retro_rnor_1298, retro_rnor_2577, retro_rnor_2849, retro_rnor_2902, retro_rnor_635, retro_rnor_663, retro_rnor_892,
Rattus norvegicus ENSRNOG00000049813 possible_ortholog 3 retrogenes
retro_rnor_2082, retro_rnor_30, retro_rnor_78,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_57 96.91 100.00
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Download FASTA sequences of all ENSPTRG00000011449 retrocopies