Parental gene:

DESI2, ENSPTRG00000002180

Aliases:None
Description:desumoylating isopeptidase 2 [Source:HGNC Symbol;Acc:24264]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:224096085..224115266(+)


>ENSPTRG00000002180
TTTTCTCAGTATTGGATGAACGAATATACCTCATCCATTGGAATTGGAGTTTTTCATTCAGGAATTGAAGTCTATGGCAG
AGAATTTGCTTATGGTGGCCATCCTTACCCCTTTTCTGGAATATTTGAAATTTCCCCAGGAAATGCTTCTGAACTAGGAG
AAACATTTAAATTTAAAGAAGCTGTTGTTTTAGGGAGCACGGACTTCCTAGAAGATGATATAGAAAAAATTGTAGAAGAA
CTGGGAAAAGAATACAAAGGCAATGCTTATCATTTAATGCATAAAAACTGCAATCATTTTTCTTCAGCTTTATCAGAGAT
TCTTTGTGGGAAAGAGATTCCTCGCTGGATCAATCGACTTGCCTACTTCAGCTCCTGTATACCCTTTCTACAGAGTTGCC
TCCCGAAGGAGTGGCTCACGCCCGCAGCCCTGCAGTCTAGTGTCAGCCAAGAACTCCAGGATGAACTGGAGGAAGCAGAG
GATGCTGCCGCATCCGCTTCCGTGGCAAGCACTGCAGCAGGCTCCAGACCCGGGCGCCACACTAAACTA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .52 RPM
SRP007412_cerebellum 2 .62 RPM
SRP007412_heart 2 .59 RPM
SRP007412_kidney 1 .46 RPM
SRP007412_liver 0 .88 RPM
SRP007412_testis 25 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000016 ortholog_one2one 1 retrogene
retro_chof_2439,
Dasypus novemcinctus ENSDNOG00000003484 ortholog_one2one 3 retrogenes
retro_dnov_1042, retro_dnov_2533, retro_dnov_539,
Erinaceus europaeus ENSEEUG00000009507 ortholog_one2one 2 retrogenes
retro_eeur_394, retro_eeur_470,
Homo sapiens ENSG00000121644 ortholog_one2one 1 retrogene
retro_hsap_2071,
Gorilla gorilla ENSGGOG00000009797 ortholog_one2one 1 retrogene
retro_ggor_1493,
Nomascus leucogenys ENSNLEG00000004019 ortholog_one2one 1 retrogene
retro_nleu_2734,
Ochotona princeps ENSOPRG00000015368 ortholog_one2one 2 retrogenes
retro_opri_1007, retro_opri_963,
Pongo abelii ENSPPYG00000000055 ortholog_one2one 1 retrogene
retro_pabe_1685,
Sus scrofa ENSSSCG00000010876 ortholog_one2one 1 retrogene
retro_sscr_388,
Drosophila melanogaster FBgn0033551 ortholog_one2many 1 retrogene
retro_dmel_30,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1384 91.59 58.47
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Download FASTA sequences of all ENSPTRG00000002180 retrocopies