Parental gene:

PPPDE1, ENSGGOG00000009797

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:1:225217351..225241084(+)


>ENSGGOG00000009797
ATAAACCTGGAACAATTAAAGGTTTGTAACACTTTTGAGTGTTACTATTGGATGAACGAATATACCTCATCCATTGGAAT
TGGAGTTTTTCATTCAGGAATTGAAGTCTATGGCAGAGAATTTGCTTATGGTGGCCATCCTTACCCCTTTTCTGGAATAT
TTGAAATTTCCCCAGGAAATGCTTCTGAACTAGGAGAAACATTTAAATTTAAAGAAGCTGTTGTTTTAGGGAGCACGGAC
TTCCTAGAAGATGATATAGAAAAAATTGTAGAAGAACTGGGAAAAGAATACAAAGGCAATGCTTATCATTTAATGCATAA
AAACTGCAATCATTTTTCTTCAGCTTTATCAGAGATTCTTTGTGGGAAAGAGATTCCTCGCTGGATCAATCGACTTGCCT
ACTTCAGCTCCTGTATACCCTTTCTACAGAGTTGCCTCCCGAAGGAGTGGCTCACGCCCGCAGCTCTGCAGTCTAGTGTC
AGCCAAGAACTCCAGGATGAACTGGAGGAAGCAGAGGATGCTGCCGCATCCGCTTCCGTGGCAAGCACTGCAGCAGGCTC
CAGACCCGGGCGCCACACTAAACTATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .27 RPM
SRP007412_cerebellum 14 .03 RPM
SRP007412_heart 4 .66 RPM
SRP007412_kidney 12 .39 RPM
SRP007412_liver 14 .22 RPM
SRP007412_testis 148 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000016 ortholog_one2one 1 retrogene
retro_chof_2439,
Dasypus novemcinctus ENSDNOG00000003484 ortholog_one2one 3 retrogenes
retro_dnov_1042, retro_dnov_2533, retro_dnov_539,
Erinaceus europaeus ENSEEUG00000009507 ortholog_one2one 2 retrogenes
retro_eeur_394, retro_eeur_470,
Homo sapiens ENSG00000121644 ortholog_one2one 1 retrogene
retro_hsap_2071,
Nomascus leucogenys ENSNLEG00000004019 ortholog_one2one 1 retrogene
retro_nleu_2734,
Ochotona princeps ENSOPRG00000015368 ortholog_one2one 2 retrogenes
retro_opri_1007, retro_opri_963,
Pongo abelii ENSPPYG00000000055 ortholog_one2one 1 retrogene
retro_pabe_1685,
Pan troglodytes ENSPTRG00000002180 ortholog_one2one 1 retrogene
retro_ptro_1384,
Sus scrofa ENSSSCG00000010876 ortholog_one2one 1 retrogene
retro_sscr_388,
Drosophila melanogaster FBgn0033551 ortholog_one2many 1 retrogene
retro_dmel_30,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1493 89.57 58.97
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Download FASTA sequences of all ENSGGOG00000009797 retrocopies