Parental gene: | RAD23B, ENSPPYG00000019477 |
| Aliases: | None |
| Description: | RAD23 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:9813] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:103615852..103667415(+) |
>ENSPPYG00000019477
ATGGTGACCAAACCCAAAGCAGTGTCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCCAGCACTACAGCAGT
TACTTCCTCCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCTGCCTTGGCTCCCACTTCCACACCTGCATCCA
TCACTCCAGCATCAGCGACAGCATCTTCTGAACCTGCATCTGCTAGTGCAGCTAAACAAGAGAAACCTGCAGAAAAGCCA
GCAGAGACACCGGTGGCTACTAGCCCAACAGCAACTGACAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTGAAGA
TGCAACGAGTGCACTTGTGACAGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGC
AAGTGATTGCAGCCCTGAGAGCCAGTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGAT
AGAGAAAGTCAGGCTGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGC
AGCAACTACGACAGCAACAACTACAACAACAAGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAGCCTCAGTTTC
AACAGATGAGACAAATTATTCAACAGAATCCTTCCCTGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCTCAG
TTACTTCAGCAAATTAGCCAACACCAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAAGG
AGGAGGAGGTGGAGGTGGCAGTGGAGGAATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACGCCTCAGG
AAAAAGAAGCTATAGAAAGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCATATTTTGCTTGTGAGAAG
AATGAGAATTTGGCTGCCAATTTTCTTCTACAGCAGAACTTTGATGAAGATTGA
ATGGTGACCAAACCCAAAGCAGTGTCCACACCAGCACCAGCTACAACTCAGCAGTCAGCTCCTGCCAGCACTACAGCAGT
TACTTCCTCCACCACCACAACTGTGGCTCAGGCTCCAACCCCTGTCCCTGCCTTGGCTCCCACTTCCACACCTGCATCCA
TCACTCCAGCATCAGCGACAGCATCTTCTGAACCTGCATCTGCTAGTGCAGCTAAACAAGAGAAACCTGCAGAAAAGCCA
GCAGAGACACCGGTGGCTACTAGCCCAACAGCAACTGACAGTACATCGGGTGATTCTTCTCGGTCAAACCTTTTTGAAGA
TGCAACGAGTGCACTTGTGACAGGTCAGTCTTACGAGAATATGGTAACTGAGATCATGTCAATGGGCTATGAACGAGAGC
AAGTGATTGCAGCCCTGAGAGCCAGTTTCAACAACCCTGACAGAGCAGTGGAGTATCTTTTAATGGGAATCCCTGGAGAT
AGAGAAAGTCAGGCTGTGGTTGACCCCCCTCAAGCAGCTAGTACTGGGGCTCCTCAGTCTTCAGCAGTGGCTGCAGCTGC
AGCAACTACGACAGCAACAACTACAACAACAAGTTCTGGAGGACATCCCCTTGAATTTTTACGGAATCAGCCTCAGTTTC
AACAGATGAGACAAATTATTCAACAGAATCCTTCCCTGCTTCCAGCGTTACTACAGCAGATAGGTCGAGAGAATCCTCAG
TTACTTCAGCAAATTAGCCAACACCAGGAGCATTTTATTCAGATGTTAAATGAACCAGTTCAAGAAGCTGGTGGTCAAGG
AGGAGGAGGTGGAGGTGGCAGTGGAGGAATTGCAGAAGCTGGAAGTGGTCATATGAACTACATTCAAGTAACGCCTCAGG
AAAAAGAAGCTATAGAAAGGTTAAAGGCATTAGGATTTCCTGAAGGACTTGTGATACAAGCATATTTTGCTTGTGAGAAG
AATGAGAATTTGGCTGCCAATTTTCTTCTACAGCAGAACTTTGATGAAGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 96 .10 RPM |
| SRP007412_cerebellum | 107 .50 RPM |
| SRP007412_heart | 63 .79 RPM |
| SRP007412_kidney | 66 .86 RPM |
| SRP007412_liver | 84 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001926 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016908 | ortholog_one2many | 2 retrogenes | |
| Equus caballus | ENSECAG00000021928 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000119318 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000002511 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014944 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017319 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000007316 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014216 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021229 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011925 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000005436 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007597 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2344 | 84.24 | 91.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_3162 | 65.50 | 50.45 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000019477 retrocopies