Parental gene: | NT5DC1, ENSPPYG00000016943 |
| Aliases: | None |
| Description: | 5'-nucleotidase domain containing 1 [Source:HGNC Symbol;Acc:21556] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:118375818..118519320(+) |
>ENSPPYG00000016943
ATGGCTCAGCACTTCTCCCTGGCCGCCTGCGACGTGGTCGGATTCGACCTGGACCACACTCTGTGTCGCTACAACCTGCC
CGAGAGCGCCCCGCTCATTTATAATAGCTTTGCCCAGTTCCTGGTTAAGGAGAAAGGGTATGATAAGGAATTGCTCAATG
TGACCCCAGAGGATTGGGATTTCTGTTGCAAAGGTTTGGCATTGGATCTAGAAGATGGGAACTTCCTTAAACTTGCAAAT
AATGGCACTGTTCTCAGGGCAAGCCATGGCACGAAGATGATGACTGCAGAGGTGCTGGCAGAGGCATATGGCAAGAAAGA
GTGGAAGCACTTCTTGTCGGACACTGGAATGGCTTGCCGCTCAGGAAAGTATTACTTTTACGACAACTACTTCGACCTGC
CAGGAGCTCTTCTGTGTGCCAGGGTGGTGGACTATTTAACAAAACAGAACAATGGTCAAAAAACATTTGATTTTTGGAAG
GATATAGTTGCTGCTATACAACACAATTATAAAATGTCAGCTTTTAAGGAAAACTGTGGAATATATTTTCCAGAAATAAA
AAGAGATCCAGGCAGATATTTACACAGTTGTCCTGAATCTGTGAAAAAATGGCTTCGACAGCTAAAGAATGCTGGGAAAA
TTCTTCTGTTAATTACCAGTTCTCACAGTGATTACTGTAGACTTCTCTGCGAATATATCCTTGGGAATGATTTTACAGAC
CTTTTTGACATTGTGATTACAAATGCATTGAAGCCTGGTTTCTTCTCCCACTTACCAAGTCAGAGACCTTTCCGGACACT
CGAGAATGATGAGGAGCAGGAGGCACTGCCATCTCTGGATAAACCTGGCTGGTACTCCCAGGGGAACGCTGTCCACCTCT
ATGAACTTCTGAAGAAAATGACTGGCAAACCTGAACCCAAGGGACCAAAAGCAAAGCCTTTAAATACTTCATCTAGAAAA
TGGGGCTCTTTTTTTATTGATTCAGTTTTGGGACTGGAAAATACAGAAGACTCCTTGGTTTATACATGGTCTTGTAAGAG
AATCAGTACTTACAGCACTATTGCAATTCCAAGTATTGAAGCAATCGCAGAATTACCTCTGGACTACAAATTTACAAGAT
TCTCTTCAAGCAATTCAAAAACAGCTGGCTACTATCCAGATCCTCCACTGGTTTTATCAAGTGATGAGACACTCATATCC
AAATAA
ATGGCTCAGCACTTCTCCCTGGCCGCCTGCGACGTGGTCGGATTCGACCTGGACCACACTCTGTGTCGCTACAACCTGCC
CGAGAGCGCCCCGCTCATTTATAATAGCTTTGCCCAGTTCCTGGTTAAGGAGAAAGGGTATGATAAGGAATTGCTCAATG
TGACCCCAGAGGATTGGGATTTCTGTTGCAAAGGTTTGGCATTGGATCTAGAAGATGGGAACTTCCTTAAACTTGCAAAT
AATGGCACTGTTCTCAGGGCAAGCCATGGCACGAAGATGATGACTGCAGAGGTGCTGGCAGAGGCATATGGCAAGAAAGA
GTGGAAGCACTTCTTGTCGGACACTGGAATGGCTTGCCGCTCAGGAAAGTATTACTTTTACGACAACTACTTCGACCTGC
CAGGAGCTCTTCTGTGTGCCAGGGTGGTGGACTATTTAACAAAACAGAACAATGGTCAAAAAACATTTGATTTTTGGAAG
GATATAGTTGCTGCTATACAACACAATTATAAAATGTCAGCTTTTAAGGAAAACTGTGGAATATATTTTCCAGAAATAAA
AAGAGATCCAGGCAGATATTTACACAGTTGTCCTGAATCTGTGAAAAAATGGCTTCGACAGCTAAAGAATGCTGGGAAAA
TTCTTCTGTTAATTACCAGTTCTCACAGTGATTACTGTAGACTTCTCTGCGAATATATCCTTGGGAATGATTTTACAGAC
CTTTTTGACATTGTGATTACAAATGCATTGAAGCCTGGTTTCTTCTCCCACTTACCAAGTCAGAGACCTTTCCGGACACT
CGAGAATGATGAGGAGCAGGAGGCACTGCCATCTCTGGATAAACCTGGCTGGTACTCCCAGGGGAACGCTGTCCACCTCT
ATGAACTTCTGAAGAAAATGACTGGCAAACCTGAACCCAAGGGACCAAAAGCAAAGCCTTTAAATACTTCATCTAGAAAA
TGGGGCTCTTTTTTTATTGATTCAGTTTTGGGACTGGAAAATACAGAAGACTCCTTGGTTTATACATGGTCTTGTAAGAG
AATCAGTACTTACAGCACTATTGCAATTCCAAGTATTGAAGCAATCGCAGAATTACCTCTGGACTACAAATTTACAAGAT
TCTCTTCAAGCAATTCAAAAACAGCTGGCTACTATCCAGATCCTCCACTGGTTTTATCAAGTGATGAGACACTCATATCC
AAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 3 .37 RPM |
| SRP007412_cerebellum | 5 .23 RPM |
| SRP007412_heart | 9 .54 RPM |
| SRP007412_kidney | 8 .55 RPM |
| SRP007412_liver | 7 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000178425 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000008313 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013080 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000018523 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_3703 | 88.39 | 76.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000016943 retrocopies