Parental gene:

PPID, ENSPPYG00000015159

Aliases:None
Description:peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:9257]
Organism:Orangutan (Pongo abelii)
Coordinates:4:164743668..164761466(-)


>ENSPPYG00000015159
ATGTCGCACCCGTCCCCCCAAGCCAAGCCCTCCAACCCCAGTAACCCTCGAGTCTTCTTTGACGTGGACATCGGAGGGGA
GCGAGTTGGTCGAATTGTCTTAGAATTGTTTGCAGATATCGTACCCAAAACTGCGGAAAATTTTCGTGCACTGTGTACAG
GAGAAAAGGGCATTGGACACACGACTGGGAAACCTCTCCATTTCAAAGGATGCCCTTTTCATCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTCCATTACAAGCATGATCAGGAGGGTTTACTGAGCATGGCAAATGCAGGCCGCAACACAAATGGTTCTCAGTTTTTTA
TCACAACAGTTCCAACTCCTCATTTGGATGGGAAACATGTGGTGTTTGGCCAAGTAATTAAAGGAATAGGAGTGGCAAGG
ATATTGGAAAATGTGGAAGTGAAAGGTGAAAAACCTGCTAAATTGTGCGTTATTGCAGAATGTGGAGAATTGAAGGAAGG
AGATGATTGGGGAATATTCCCAAAAGATGGCTCTGGCGACAGTCATCCAGATTTCCCTGAGGATGCGGATATAGATTTAA
AAGACGTAGATAAAATTTTATTAATAACAGAAGACTTAAAAAACATTGGAAATACTTTTTTCAAATCCCAGAACTGGGAG
ATGGCCATTAAAAAATATGCAAAAGTTTTAAGATACGTGGACAGTTCAAAGGCTGTTATTGAGACAGCAGATAGAGCCAA
GCTGCAACCTATAGCTTTAAGCTGTGTACTGAATATTGGTGCTTGTAAACTGAAGATGTCAAATTGGCAGGGAGCAATTG
ACAGTTGTTTAGAGGCTCTTGAAATAGACCCATCAAATACCAAAGCATTGTACCGCAGAGCTCAAGGATGGCAAGGATTA
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAAGCTCAGGAGATAGCACCAGAAGATAAAGCTATCCAGGCAGAATT
GCTGAAAGTCAAACAAAAAATAAAGGCACAGAAAGATAAAGAGAAGGCAGTATATGCAAAAATGTTTGCTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 17 .20 RPM
SRP007412_cerebellum 16 .42 RPM
SRP007412_heart 7 .50 RPM
SRP007412_kidney 10 .84 RPM
SRP007412_liver 9 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016680 ortholog_one2one 1 retrogene
retro_btau_1672,
Choloepus hoffmanni ENSCHOG00000012069 ortholog_one2one 1 retrogene
retro_chof_1533,
Callithrix jacchus ENSCJAG00000001437 ortholog_one2one 2 retrogenes
retro_cjac_2321, retro_cjac_4162,
Echinops telfairi ENSETEG00000012655 possible_ortholog 2 retrogenes
retro_etel_10, retro_etel_633,
Felis catus ENSFCAG00000028926 ortholog_one2one 2 retrogenes
retro_fcat_494, retro_fcat_559,
Myotis lucifugus ENSMLUG00000009317 ortholog_one2one 1 retrogene
retro_mluc_1667,
Macaca mulatta ENSMMUG00000017768 ortholog_one2many 2 retrogenes
retro_mmul_281, retro_mmul_348,
Mustela putorius furo ENSMPUG00000018108 ortholog_one2one 1 retrogene
retro_mputfur_1415,
Oryctolagus cuniculus ENSOCUG00000006602 ortholog_one2one 1 retrogene
retro_ocun_1625,
Otolemur garnettii ENSOGAG00000003317 ortholog_one2one 2 retrogenes
retro_ogar_2355, retro_ogar_2680,
Rattus norvegicus ENSRNOG00000027408 possible_ortholog 1 retrogene
retro_rnor_188,
Ictidomys tridecemlineatus ENSSTOG00000001552 ortholog_one2one 1 retrogene
retro_itri_1422,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3594 96.54 70.27
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Download FASTA sequences of all ENSPPYG00000015159 retrocopies