Parental gene: | MMU.1320, ENSMMUG00000017768 |
| Aliases: | None |
| Description: | peptidylprolyl isomerase D [Source:RefSeq peptide;Acc:NP_001252763] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 5:150882199..150896124(-) |
>ENSMMUG00000017768
ATGTCGCATCCGTCCCCCCAAGTCAAGCCCTCCAACCCCAGTAACCCTCGAGTCTTCTTTGACGTGGACATAGGAGGGGA
GCGAGTTGGTCGAATTGTCTTAGAATTGTTTGCAGATATTGTACCCAAAACTGCGGAAAATTTTCGTGCACTGTGTACAG
GAGAAAAAGGCATTGGACCCACGACTGGGAAACCTCTCCATTTCAAAGGATGCCCTTTTCATCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTCCACTATAAGCATGATCGGGAGGGTTTACTGAGCATGGCAAACGCAGGCCGCAACACAAATGGTTCTCAGTTTTTTA
TCACAACAGTTCCAACTCCTCATTTGGATGGGAAACATGTGGTGTTTGGCCAAGTAATTAAAGGAATAGGAGTGACAAGG
ATATTGGAAAATGTGGAAGTGAAAGGTGAAAAACCTGCTAAATTGTGCATTATTGCAGAATGTGGAGAATTGAAGGAAGG
AGATGACTGGGGAATATTCCCAAAAGATGGCTCTGGCGACAGTCATCCAGATTTCCCTGAGGATGCAGATGTAGATTTAA
AAGACGTAGATAAAATTTTATTAATAACAGAAGACTTAAAAAATATTGGAAATACTTTTTTCAAATCCCAGAACTGGGAG
ATGGCCATTAAAAAATATGCAAAAGTTTTAAGATACGTGGACAGTTCAAAGGCTGTTATTGAGACAGCAGATAGAGCCAA
GCTGCAACCTATAGCTTTAAGCTGTGTACTGAATATTGGTGCTTGTAAACTGAAGATGTCAAATTGGCAGGGAGCAATTG
ACAGTTGTTTGGAGGCTCTTGAAATAGACCCATCAAATACCAAAGCATTGTACCGCAGAGCTCAAGGATGGCAAGGATTA
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAAGCACAGGAGATAGCACCAGAAGATAAAGCTATCCAGGCAGAACT
GCTGAAAGTCAAACAAAAGATAAAGGCCCAGAAAGATAAAGAGAAGGCAGTATATGCAAAAATGTTTGCTTAG
ATGTCGCATCCGTCCCCCCAAGTCAAGCCCTCCAACCCCAGTAACCCTCGAGTCTTCTTTGACGTGGACATAGGAGGGGA
GCGAGTTGGTCGAATTGTCTTAGAATTGTTTGCAGATATTGTACCCAAAACTGCGGAAAATTTTCGTGCACTGTGTACAG
GAGAAAAAGGCATTGGACCCACGACTGGGAAACCTCTCCATTTCAAAGGATGCCCTTTTCATCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGGACAGGTGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTCCACTATAAGCATGATCGGGAGGGTTTACTGAGCATGGCAAACGCAGGCCGCAACACAAATGGTTCTCAGTTTTTTA
TCACAACAGTTCCAACTCCTCATTTGGATGGGAAACATGTGGTGTTTGGCCAAGTAATTAAAGGAATAGGAGTGACAAGG
ATATTGGAAAATGTGGAAGTGAAAGGTGAAAAACCTGCTAAATTGTGCATTATTGCAGAATGTGGAGAATTGAAGGAAGG
AGATGACTGGGGAATATTCCCAAAAGATGGCTCTGGCGACAGTCATCCAGATTTCCCTGAGGATGCAGATGTAGATTTAA
AAGACGTAGATAAAATTTTATTAATAACAGAAGACTTAAAAAATATTGGAAATACTTTTTTCAAATCCCAGAACTGGGAG
ATGGCCATTAAAAAATATGCAAAAGTTTTAAGATACGTGGACAGTTCAAAGGCTGTTATTGAGACAGCAGATAGAGCCAA
GCTGCAACCTATAGCTTTAAGCTGTGTACTGAATATTGGTGCTTGTAAACTGAAGATGTCAAATTGGCAGGGAGCAATTG
ACAGTTGTTTGGAGGCTCTTGAAATAGACCCATCAAATACCAAAGCATTGTACCGCAGAGCTCAAGGATGGCAAGGATTA
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAAGCACAGGAGATAGCACCAGAAGATAAAGCTATCCAGGCAGAACT
GCTGAAAGTCAAACAAAAGATAAAGGCCCAGAAAGATAAAGAGAAGGCAGTATATGCAAAAATGTTTGCTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .33 RPM |
| SRP007412_brain | 5 .38 RPM |
| SRP007412_cerebellum | 6 .01 RPM |
| SRP007412_heart | 3 .83 RPM |
| SRP007412_kidney | 5 .52 RPM |
| SRP007412_liver | 2 .69 RPM |
| SRP007412_testis | 5 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000016680 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000012069 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001437 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000001046 | possible_ortholog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000012655 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000028926 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000009317 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000018108 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000027804 | possible_ortholog | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000006602 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003317 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000015159 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000027408 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001552 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016269 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_281 | 97.03 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_348 | 98.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000017768 retrocopies