Parental gene:

MRPL40, ENSPPYG00000011578

Aliases:None
Description:mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:14491]
Organism:Orangutan (Pongo abelii)
Coordinates:22:15355931..15358669(+)


>ENSPPYG00000011578
CTTCTGGGAACTTGGCAGACGCAGATTAGAGAGACTCACCAGCGAGCGTCATTGTTGTCTTTCTGGGAACTCATTCCCAT
GAGATCAGAACCTCTTCGAAAGAAGAAGAAGGTAGATCCTAAAAAAGACCAAGAAGCAAAGGAGCGCTTGAAAAGGAAGA
TCCGAAAACTGGAAAAGGCTGCTCAAGAGCTAATTCCTATTGAAGATTTTATTACCCCTCTAAAGTTCTTGGATAAAGCA
AGAGAGCGGCCTCAGGTGGAGCTCACCTTTGAGGAGACTGAGAGGAGAGCTCTGCTTCTGAAGAAGTGGTCTTTGTACAA
GCAGCAAGAGCATAAGATGGAGAGGGACACCATCAGGGCTATGCTAGAAGCCCAGCAGGAAGCTCTGGAGGAACTGCGAC
TGGAGTCCCCGAAACTCCATGCTGAGGCCATCAAGCGGGATCCTAACCTGTTCCCCTTTGAGAAGGAAGGGCCACATTAC
ACACCACCGATTCCTAACTACCAGCCCCCTGAAGGCAGGTACAATGACATCACCAAGGTGTACACACAAGTGGAGTTTAA
GAGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 14 .15 RPM
SRP007412_cerebellum 18 .48 RPM
SRP007412_heart 19 .42 RPM
SRP007412_kidney 29 .40 RPM
SRP007412_liver 41 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000001053 ortholog_one2one 1 retrogene
retro_acar_149,
Ailuropoda melanoleuca ENSAMEG00000011421 ortholog_one2one 1 retrogene
retro_amel_257,
Callithrix jacchus ENSCJAG00000001584 ortholog_one2one 1 retrogene
retro_cjac_3220,
Equus caballus ENSECAG00000009876 ortholog_one2one 1 retrogene
retro_ecab_687,
Homo sapiens ENSG00000185608 ortholog_one2one 1 retrogene
retro_hsap_1020,
Gorilla gorilla ENSGGOG00000012336 ortholog_one2one 1 retrogene
retro_ggor_807,
Myotis lucifugus ENSMLUG00000002456 ortholog_one2many 1 retrogene
retro_mluc_1950,
Macaca mulatta ENSMMUG00000016081 ortholog_one2many 1 retrogene
retro_mmul_57,
Mustela putorius furo ENSMPUG00000003865 ortholog_one2one 1 retrogene
retro_mputfur_394,
Nomascus leucogenys ENSNLEG00000005372 ortholog_one2one 1 retrogene
retro_nleu_899,
Rattus norvegicus ENSRNOG00000049686 ortholog_one2one 1 retrogene
retro_rnor_1624,
Tarsius syrichta ENSTSYG00000014747 ortholog_one2one 1 retrogene
retro_tsyr_1589,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_857 63.74 96.28
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Download FASTA sequences of all ENSPPYG00000011578 retrocopies